G93323


Basic Information

Item Value
gene id G93323
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 83294266 ~ 83295630 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU102778
CCAGTATGAGGTCCCCAGGCTGCAGGCCCTCTGGTCCCCTAGCAGGGCTGTCCTCCTCCAGACTCTTTACATAGACCCCCCGGAGGTTCCCTCCacacagccccagccccagctctgcACCCTGGGCCCTGAGCACCGTCACCACCCGCGGCTCACACACCTTACAACTGCCCTCTGACGACACCCTGGAGTGGAGAAGGGAAGAACGCAAATACCTTACCAaacagaaatgtgtcttctgcggTACCCAACCCCTGCAATATACACAAATCCACATGAAGTTGGAGAGGCTGGAGCAGTCAGAAGTGGGCCCGGCagaggtgtgtgttacctgatgAAGCTGTGAGGACTAGTTGTAGGGGTGGTCTGTTTGGAGGAGGGGGTGAGTGTTCCTTCGTCCTGTTCACTCAGAGTGTCTATAGTAGAGTGGTTGTCTGGGGTGGTGGCTCCACTGCCCTGGGGCGTGAACTGGCTGCTCACCGGCTCCAGACCAGAACTACacacgcagagagagaaaaaccgTAGACCGCTGCATAACTCGGGAGCCCatactaaggcactgcatctcagtgctagaggtgtcactacagacaccctggttcgaatccaggctgtatcacaaccagccgtgattgggagtcccacaggatgggtttggccggtgtaggccatcattggaaataagatttattttcttaactgacttgcctagttaaataaaggttaaatattggTATAATCTATTTAAAAGGTGGTAAATGAGGCCTGTATATTTTATACGACTACGAGATTTGTCATGGCATGTCCTAGGTCAATTTGACACGCCTTTTGAAGTATGAAAGACTGACATTATCTTTGATTACTCATATATTTATGTAAATTGACCACTGGGAAGAAATGTCATTGTTTACCTGGAACGTGAGGGGTTTCCCAGCTGGTACATGTGGGGGTTGTATTGAGCCATAATGGTGATGGTGTCACACTGCTGACCAATGATCAGCCTGGCCTGCTGCTCTGTGGCATTACGCAGGTTAATACCGTTATACTGGAGGGAAGAGAAAGTTTAGATGTTATTGAAAAATCCTCACTGAAAATAAACAGCACTTCTCAATTCTACAGGACATATTCAGGCattaataattattattttattttttattattgaatATTCGaaacttgcagtgaagccgctcaacaactgcatcataccagtcatccaacagatctcattcagagcgacacacagaaacatccagggtcaatgccctgatCAAGGGCTCGTTGACAGTtctcccaccaggccaaaaaacgtgAACCCCAACCCTCCAAGATcaccccacagttccccaatagctgtccctcaac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102778 True 1365 lncRNA 0.48 1 83294266 83295630

Neighbor

gene id symbol gene type direction distance location
LOC110530624 cssa18h10orf11 coding upstream 377855 82456299 ~ 82916411 (+)
LOC110530588 LOC106577200 coding upstream 1115189 82172076 ~ 82179077 (+)
LOC110530572 LOC106577202 coding upstream 1145417 82128619 ~ 82163498 (+)
LOC110530536 LOC106577203 coding upstream 1290613 81910118 ~ 82005198 (+)
LOC110530526 LOC106577204 coding upstream 1386867 81906132 ~ 81907399 (+)
LOC110530670 NA coding downstream 112021 83407651 ~ 83442131 (+)
LOC110530741 LOC106577189 coding downstream 156618 83452248 ~ 83484011 (+)
LOC110530763 LOC106577187 coding downstream 215487 83511117 ~ 83667671 (+)
LOC110530841 LOC106613168 coding downstream 426229 83721859 ~ 83798056 (+)
LOC110530850 LOC106577251 coding downstream 502801 83798431 ~ 83817516 (+)
G93321 LOC106613304 non-coding upstream 3591 83289672 ~ 83290675 (+)
G93318 NA non-coding upstream 9095 83284932 ~ 83285171 (+)
G93313 NA non-coding upstream 11182 83282706 ~ 83283084 (+)
G93315 NA non-coding upstream 15385 83278486 ~ 83278881 (+)
G93312 NA non-coding upstream 21498 83272534 ~ 83272768 (+)
G93325 NA non-coding downstream 1371 83297001 ~ 83297233 (+)
G93326 NA non-coding downstream 1664 83297294 ~ 83297567 (+)
G93327 NA non-coding downstream 3127 83298757 ~ 83299082 (+)
G93332 NA non-coding downstream 9607 83305237 ~ 83305570 (+)
G93333 LOC106577192 non-coding downstream 10737 83306367 ~ 83307156 (+)
G93204 NA other upstream 204334 83088531 ~ 83089932 (+)
G92575 trmt13 other upstream 1112470 82180946 ~ 82181796 (+)
G92511 NA other upstream 1151679 82142124 ~ 82142587 (+)
G93362 NA other downstream 37636 83333266 ~ 83333576 (+)
G94463 NA other downstream 749681 84045311 ~ 84048149 (+)
LOC110532822 LOC106577256 other downstream 1087127 84373236 ~ 84410052 (+)

Expression


Co-expression Network