G93338


Basic Information

Item Value
gene id G93338
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 83317582 ~ 83317801 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU102793
ctcccttctctctctcccctgtactcaccgtatgctctcgctctctgccactattttccctctctccatcctcccttctctctctcccctgtactcaccgtatgctctctctctctgccactattttgtctctctccatcctcccttctctctctcccctgtactcaccgtatgctctctctctctgccactattttccctctctccatcctcccttctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102793 True 220 lncRNA 0.53 1 83317582 83317801

Neighbor

gene id symbol gene type direction distance location
LOC110530624 cssa18h10orf11 coding upstream 401171 82456299 ~ 82916411 (+)
LOC110530588 LOC106577200 coding upstream 1138505 82172076 ~ 82179077 (+)
LOC110530572 LOC106577202 coding upstream 1168733 82128619 ~ 82163498 (+)
LOC110530536 LOC106577203 coding upstream 1313929 81910118 ~ 82005198 (+)
LOC110530526 LOC106577204 coding upstream 1410183 81906132 ~ 81907399 (+)
LOC110530670 NA coding downstream 89850 83407651 ~ 83442131 (+)
LOC110530741 LOC106577189 coding downstream 134447 83452248 ~ 83484011 (+)
LOC110530763 LOC106577187 coding downstream 193316 83511117 ~ 83667671 (+)
LOC110530841 LOC106613168 coding downstream 404058 83721859 ~ 83798056 (+)
LOC110530850 LOC106577251 coding downstream 480630 83798431 ~ 83817516 (+)
G93337 NA non-coding upstream 3161 83314042 ~ 83314421 (+)
G93335 NA non-coding upstream 5850 83311426 ~ 83311732 (+)
G93334 NA non-coding upstream 6158 83310782 ~ 83311424 (+)
G93333 LOC106577192 non-coding upstream 10426 83306367 ~ 83307156 (+)
G93332 NA non-coding upstream 12012 83305237 ~ 83305570 (+)
G93339 NA non-coding downstream 653 83318454 ~ 83319041 (+)
G93342 LOC106577192 non-coding downstream 6802 83324603 ~ 83324847 (+)
G93343 NA non-coding downstream 7225 83325026 ~ 83325296 (+)
G93346 NA non-coding downstream 11344 83329145 ~ 83329357 (+)
G93347 NA non-coding downstream 11791 83329592 ~ 83329833 (+)
G93204 NA other upstream 227650 83088531 ~ 83089932 (+)
G92575 trmt13 other upstream 1135786 82180946 ~ 82181796 (+)
G92511 NA other upstream 1174995 82142124 ~ 82142587 (+)
G93362 NA other downstream 15465 83333266 ~ 83333576 (+)
G94463 NA other downstream 727510 84045311 ~ 84048149 (+)
LOC110532822 LOC106577256 other downstream 1064956 84373236 ~ 84410052 (+)

Expression


Co-expression Network