G94173


Basic Information

Item Value
gene id G94173
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 83551363 ~ 83556849 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU103801
cttctctctacctctctctctccctgttacttctttctttctctctctcttcctggtggGATTCCAGTTATCCTACCATTTGAGGaagtgttcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgcgggGAGAGAGGTAGTAATCCGTAATAAGGGGAACAGAGTAACAGCACTAACAGTGCAGTGAGAGAAGGAAAAGCTAATTAAAtactggccacacacacacatacacacacccagcaGCAGCTGTCACAGAGGAAGTGGATAGCAGTGTGGCGTGACGCACAAGATCTATGGTGACAAAAAAGTATACAGGGACAATGATATGACCTTTAGAGCAGGTGGAAGAGGATATGATGAGTGTGTTCTATTTAATTAACTGGGAGTGCGACACTCTGTTGTCATTTGCCAGCTGAGACTGAATCTGTTGGATGGGGGGGCTGTTTTCACACTCTGTCCTTATAAGAAGGTATACTTCAGTGATCAGTATGCAGTAGCTGTACGTTGGTGGTCCTCATAAGAGAGCTAGCTTCCGTCATCAGTATGTACATAGCTAATGAGAGATCTAcccaggcagagagaaagaggacaccGAGAGAAGGGGGGATTCTAGTTATCaagataaataaaacatctcaaaTGAGCTACTCACTTTGGCGTTAACTTCTTTGAGGTATTTTCAGAACATCTTCTCACTTCTTTGTTTCTCCAGCTGTCAGTTCGACCACACACCGTTTACAAACTCATTTGTGGCGCCCAAATTCAAACATGACAGTTGGAACTCCACAGCAGAAAGGCTGTGATTCTTGTTGCCAGGCTACCAGTTACAATGCTTTTAGCTTGTGGTTTGCACATGCCTTTATGCAGATGGAATACAAAAAGTTTAGCTAGTGTCTGAAAGAATTATATGGATTCAATATTTGTGAAATTATTAAATATGTCTTCAAAACTCAAATAAGTATCAGAAATTGTCAAGCGGATATGGGCCTCAGCCAAGAGAAGCATATCTGGAATCAATAGAGCTTCATATCTTGAAAAATAGAGATATGCGATATATACAGTCAGTATTTGTCAACATGAAGACAGAAAATAGGATGTCACATATCTCAGGATATTAAATGAGTCCATATCCGGCCATAGGAAATGTCTGTGTGATATTCTGAGTAATCCCAATATCATATATGTCTAAAAGACATCTGGATTCAGAATTTGTCAGGATATGGTGCAAATCCACAAAACTCAAAATATGCATTAGGCATTTTCTGTATTCTGTAGGGTATCAACAACGTGTCATGTAAAGACATCCCCTGATTGGACCCTTCTTCCCCAGGGGTGTATTCATCATGATGATTCACGACAGGCTGAAAACACTTTCAAAATAATCCTGAATGTCCCAACCCCCTCATTATCTCAACCAATCATGGTTAGATTCTGTATTTTTTCAGTGTCTAAACAGATTTGTGATTTCACACTTTATTTATATTTACAGATTGCACACGAGTTTGTtattaaaggcacatgacagttgACATATTTAAGAAGGcatttttgaagaaaaaaaacccCTGTTCAAATGCAAGTAGTGACATGCGACATATGCCCAGCTTTCTGTAACGGTTCACATAGGTCTTCAGAATTTGTCAGGATATGGTTCATATCCACAAAACTCAGAATATGCATTGGACATGGTCTGTAGTCTCTCGAATATCACCTGTTGCGCATTGAAATAACCGGAGGAGCCGACCCAACCTGAGTGAAACGAACCAGCAGGATTTTTTCTCTGgcccctgttcctgcccatttcATAATGGACCAttctaaatcaaatctaattttacataATTAGTAAAGATAAGATGAAATTGAGAATAATCCAATGAGAGAACagtgtgtgcagcctgaggcaaggaacagagagCAAGCTTTTTTTGTGACTTTCAGCCacatgttgctgacaggtgtataaaatcgaacacaccgtcatgcaatctccatagacaaacatcggcagtagaatggccttgctgaagagctcagtgactttcaacgtgactgCCCATTCTCACGTATACATGTTTGTTTGTTAGGATTGTCAGCCATGGTGACACGCATTACTGGAAGTCTGCTCTTACCCTACACTGATTTCACTGTGGAGGAGAGTTTTTCCTCatggcacacacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagtcagagtAAGGAGAGACATTGGCCAGCAACCAACTCAGCCCCCTCACTACCTTTCCAATCTACTGCACAATAAATCACCTATATCATAGACTGCTTATGATCTTTGTAAATACGATTAATAACCTCATATCTGGATAGTGTATCAGGGTGTTGAAACAGTGAGAAATGTGAGAGTTTTCTGATGGCAGTAGACACAGTTTATGCATTAGAGAGACAGTATGGAGCCTGGCAGGAAGACCCGAGGGCCTCTGTGGCCGCTCAAGTGCATTACAGTTAAACACAGTACGACACAGTCACCTAATGAAACCTCTGAAGCTGttcctggagtgtgtgtgtgagtgtttgcttTCGTCATACTGTGTCTTCAGATCAGTAAatatgaaggagaagagagatgtCAGACTATTTAGAATAGTAGATCAAAACTGTTTGTAAAACACTTCGCACACACACGACAGGCTGATAGAAGTATACAATAATTAcaatttcctgtttcagcatgataatgccccatgcacaaagcgaggtccatacagaagtgtTTTGTCAAGATCGGAGtgcaagaacttgactggcctgcacagagccctgatctcaaccccatcgaacacctttgggatgaattggaacaccaactgcgagccaggcctaatcgaccaatatcagtgcccgacctcactaatgcttttgtgtctgaatggaagcaagtctctgcagcaatattccaacatctagtggaacgcctttccagaagagtggaggctgttattgcagcaaaggggggaccaactccatattaaagcccatgATTTCGGAATTAAATGTTtgacgagcaagtgtccacatacttttggaccTTCTGgaatctacctcaaatacctctacacgttgatctggtactccctctaCACAGCTCCAttgttgtgtattttattttttatttctattcaTTATTTCTTTTATAAAACGCTGCGTCGTTGGGAagggcatttcacggtaaagtctgcaccagttgtattcggaggatgtgacaaataacattagaTTTCATCTTAACCCTCCTTCCCTTTTTCTCCTCATTCTCTTTCTTGACTCATACTGTATCTTCAGGCAGAGTAGATCCTCATACTGTATCTTCAGGCAGAGTAGATCCTCATACTGTATCTTCAGGCAGAGTAGATCCTCATACTGTATCTTCAGGCAGAGTAGATCCTCATACTGTATCTTCAGGCTCCTAGATCCTCATACTGTATCTTCAGGCAGAGTAGATCCTCATACTGTATCTTCAGGTAGAGTAGATCCTCATACTGTATCTTCAGGCAGAGTAGATCCTCATACTGTATCTTCAGGCAGAGTAGATCCTGAAAAGATCCTATTTGAACTGATATAGGGAGTGATGTGAGGAGATGATGTCATTCATACGTGTGATGTTAGCTGAGAAGAAATGTGTTGGTCTGACACCAATATCATGGTCTCTGCTCAGGTATTCAGAGCACCAGAGTAGGTAGCTCTAGTGAGTGACAGGGTTCTATGCTAACCCAACAGGAGACGTGATAAAAGTACTGAGACGTTAGCGAGCGCCTAGGAGACAAACAGCTCCAACAGAGTCACCTGCCAATCATCTGGCACACAGACAGATGACAAGTACTAACGAGAAGACAGGATGTGACAGATAGTGTGTGAGTGTCCATATGTACTCGTGTGTGCGGTTACTGTGTGTGCGgttttactgtccttgtggggaccagaagtccttaCGAGGAAAATTCAGACAAGTGGGAACATTTTGCTGGTCCCCACAAGAAAAAAGACTACTTTAGGCTTAGGGTTTAGGTTTATGGTtcgggttacaattagggttagggatcgaattagggttaggttaacaGTTAGGTTTAAATTTAGGGTTATGGAAAATAGgatttgaatgggaatcaattgtttggtccccactaGGATattaaaacaaatgtgtgtgtgtgtctatgtgtactgatgtgtgcctgtgtgtgtgtgtgtgtgtgtgtctatgtgtactgatatgtgtgcctgtgtgtgtgtgtgtgtgtgtgtctgtggtttttatggctaggccgtcattgcaaataagaatttgtccttaactgacttgcctagttaaataaaggttaaataaaataaagtcaaacattttttaccatgattttggaatgagatggtcgacgagcaggtgtccacatacactacatgaccaaaagtacagtgccttgcgaaagtattcggccccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103801 True 4532 lncRNA 0.42 4 83551363 83556849

Neighbor

gene id symbol gene type direction distance location
LOC110530724 anx11 coding downstream 142063 83386983 ~ 83409300 (-)
LOC110530648 LOC106577192 coding downstream 176740 83272529 ~ 83374623 (-)
LOC100301648 LOC106577193 coding downstream 284200 82949609 ~ 83267163 (-)
LOC110530617 zn503 coding downstream 1109038 82439142 ~ 82442325 (-)
LOC110532782 LOC106577197 coding downstream 1249496 82291777 ~ 82301867 (-)
LOC110532793 lox5 coding upstream 119215 83676064 ~ 83701456 (-)
LOC110530770 slc25a16 coding upstream 156503 83713352 ~ 83721914 (-)
LOC110530866 nfu1 coding upstream 270100 83814162 ~ 83851846 (-)
si:ch211-198a12.6 LOC106577248 coding upstream 394208 83951057 ~ 83956958 (-)
LOC110532804 NA coding upstream 409316 83966165 ~ 83967505 (-)
G94213 NA non-coding downstream 48374 83502274 ~ 83502989 (-)
G94211 NA non-coding downstream 50706 83500344 ~ 83500657 (-)
G94191 NA non-coding downstream 51875 83499271 ~ 83499488 (-)
G94208 NA non-coding downstream 55079 83496078 ~ 83496284 (-)
G94206 NA non-coding downstream 56133 83494996 ~ 83495230 (-)
G94172 NA non-coding upstream 9183 83566032 ~ 83567505 (-)
G94310 NA non-coding upstream 106000 83662849 ~ 83663171 (-)
G94311 NA non-coding upstream 106507 83663356 ~ 83664224 (-)
G94312 NA non-coding upstream 108231 83665080 ~ 83665594 (-)
G94313 NA non-coding upstream 108806 83665655 ~ 83665882 (-)
G94201 NA other downstream 65426 83484056 ~ 83485937 (-)
G92566 NA other downstream 1389620 82160407 ~ 82161743 (-)
LOC110530475 eif4ebp2 other downstream 1934039 81607478 ~ 81629726 (-)
G94613 NA other upstream 244483 83801332 ~ 83802471 (-)
LOC110531033 LOC106577242 other upstream 601974 84157529 ~ 84256949 (-)
G94821 NA other upstream 646638 84203487 ~ 84204464 (-)
LOC110532813 LOC106613040 other upstream 734911 84291760 ~ 84331700 (-)
G95494 NA other upstream 1172015 84728864 ~ 84729423 (-)

Expression


Co-expression Network