G94333 (LOC106577185)


Basic Information

Item Value
gene id G94333
gene name LOC106577185
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 83723908 ~ 83725485 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU103989
TCATTGGACCAGAACCCAGGTCACAATCAGAGACAGATACAATGTCTTTGTCTGGTTCAGACCCAGTGGTGAAGACGTCTTTCTTTGTGTATgggagtgatgatgatgatggtggttcTTCTGGGTAATTGTTGTGGTTGTTTGACAATGGACCCAGGTCAGGTACAGACACATTGATGGGGACCTCCGCGTTGGTGTACAGGTCTGAAGATGATGATGCAGACGATGAAGATAATTTTACATTGGGTTGATTGGATGACTCTTTGGTCTCTTTGTCCACTGGTCTGAGAAGTTGTCTAGCCTCTGGAGAGACAGGGCTCTCTGGGCTCTGACCGGGTGCTGGGTTTGCTGGGATTACACACAGAGACTTGTGGGGTTCACTGAGGAAGGCAACTGAGAGACTTAGTGATACTGGGTGCACTGAGGTCGTCTGTGATGTCTCATGGAAAGTAGTTGGGACTTTTAAAGGTTTATGGATTTCAACAGTTTGGGTAGGTTGGATTAGTTTTGCACCTTGGTTCAGAACCTTAATGTCATGTGACATTGTAGGGTGAAGTGTAAAGGTCGggtgaggatgagggagagggggtgaCACCAGGTCTGAGGTAGCTGGTTCAGCGACAGATGGGGGATGGACAGGTGATTGCATCATCAACACATCATCCTGCAGAGGTGGCTTTTGGGGCTGAGAGACAGAAATACTGGCGCTTGTGTCTGGAGGTCTGCTGAACTCTCTCTTCTCCAGTCTctcatctttctcctctctttccttggTCTCCTTCACCTTGACtatctccactctctcctccccctctgcttTCTTCTTTTCTTCATcagtcttctctccttcctctactgcTTCCTTTCCGTCCTTCTccaacctctcccctcctctctgctcctctgcatgagtatctctctctctctgctccatctcAATCTGCTCAGCTCCAAGGTTAATCTTGGCTTTGTCTTCACCTTTAGGGACGACTGACACTTCCTGCCTCTCATCACTGGTAGAGTCACCAAGCTCATGGCTCTGGTAGAATTGCGCTGAATTGCCCTCACTAATATTATTGACTAGCTTTTCCTGTTGTTGGTCAACACTGATGGGGACATTGAGCTCAGAGTGTTTGCCCTCACCACTATGGCTGAAAGGCTTATCGTGTGGGTCAGTACCAACCGCGTCACCATTATGGGCAACTAACTCTTCATGTTTGTCATCACTAGCTGAGTCATCAGTTCTCAGGTTAAGAGGTTTGCCCTCACCATCATGGCCGACTCCTGGCTCCTGCTGGTCAATACAGGAATGGTCATCAAGTTCAGTCCTCTGGTTAGGTTTTCCCTCACATTCATGGCCAACTCCTGGTTCCTGCTGGTCAACACAGGAAGGGTCTTCAAGTTCAGTCCTTAGGTTAAGAGGTTGGCCCTCACTATCATGGCTGACTACCTCCTTCTCTTGGTCAATCATACTAGGGTCTATACTACCAGGGT

Function

NR:

description
methylcytosine dioxygenase TET1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103989 True 1494 lncRNA 0.49 2 83723908 83725485

Neighbor

gene id symbol gene type direction distance location
LOC110530770 slc25a16 coding downstream 1994 83713352 ~ 83721914 (-)
LOC110532793 lox5 coding downstream 22452 83676064 ~ 83701456 (-)
LOC110530724 anx11 coding downstream 314608 83386983 ~ 83409300 (-)
LOC110530648 LOC106577192 coding downstream 349285 83272529 ~ 83374623 (-)
LOC100301648 LOC106577193 coding downstream 456745 82949609 ~ 83267163 (-)
LOC110530866 nfu1 coding upstream 101464 83814162 ~ 83851846 (-)
si:ch211-198a12.6 LOC106577248 coding upstream 225572 83951057 ~ 83956958 (-)
LOC110532804 NA coding upstream 240680 83966165 ~ 83967505 (-)
LOC110530927 LOC106577245 coding upstream 306069 84031554 ~ 84104730 (-)
LOC110530947 LOC106577244 coding upstream 372142 84097627 ~ 84110671 (-)
G94316 NA non-coding downstream 36697 83686905 ~ 83687211 (-)
G94259 NA non-coding downstream 47980 83669522 ~ 83675928 (-)
G94314 NA non-coding downstream 56990 83666572 ~ 83666918 (-)
G94313 NA non-coding downstream 58026 83665655 ~ 83665882 (-)
G94334 NA non-coding upstream 1244 83726729 ~ 83727048 (-)
G94336 LOC100194703 non-coding upstream 6342 83731827 ~ 83732179 (-)
G94337 NA non-coding upstream 7129 83732614 ~ 83732829 (-)
G94341 NA non-coding upstream 14727 83740212 ~ 83740599 (-)
G94342 NA non-coding upstream 15317 83740802 ~ 83741225 (-)
G94201 NA other downstream 237971 83484056 ~ 83485937 (-)
LOC110532782 LOC106577197 other downstream 1422061 82291777 ~ 82301867 (-)
G92566 NA other downstream 1562165 82160407 ~ 82161743 (-)
LOC110530475 eif4ebp2 other downstream 2106584 81607478 ~ 81629726 (-)
G94613 NA other upstream 75847 83801332 ~ 83802471 (-)
LOC110531033 LOC106577242 other upstream 433338 84157529 ~ 84256949 (-)
G94821 NA other upstream 478002 84203487 ~ 84204464 (-)
LOC110532813 LOC106613040 other upstream 566275 84291760 ~ 84331700 (-)
G95494 NA other upstream 1003379 84728864 ~ 84729423 (-)

Expression


Co-expression Network