G93522


Basic Information

Item Value
gene id G93522
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 83772374 ~ 83772921 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU103004
cttctctctgttcctccttcACCTTCTCTCAATCATTtacctccctcaccttctctctgttcctccctcaccttctctctgttcttccctcaccttctctctgttcctcccttaccttctctgttcctccctcaccttctctgttcctccctcaccttctctgttcctccctcaccttctctcaatgttcctccctcaccttctctcaatgtttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103004 True 216 lncRNA 0.42 2 83772374 83772921

Neighbor

gene id symbol gene type direction distance location
LOC110530763 LOC106577187 coding upstream 104703 83511117 ~ 83667671 (+)
LOC110530741 LOC106577189 coding upstream 288363 83452248 ~ 83484011 (+)
LOC110530670 NA coding upstream 330243 83407651 ~ 83442131 (+)
LOC110530624 cssa18h10orf11 coding upstream 855963 82456299 ~ 82916411 (+)
LOC110530588 LOC106577200 coding upstream 1593297 82172076 ~ 82179077 (+)
LOC110530850 LOC106577251 coding downstream 25510 83798431 ~ 83817516 (+)
zgc:110319 nfu1 coding downstream 67835 83840756 ~ 83851899 (+)
LOC110530876 LOC106577249 coding downstream 79645 83852566 ~ 83889994 (+)
LOC110530893 LOC106577247 coding downstream 130861 83903782 ~ 83951597 (+)
zgc:154058 LOC106577246 coding downstream 204197 83977118 ~ 84031022 (+)
G93519 NA non-coding upstream 7243 83764216 ~ 83765131 (+)
G93513 NA non-coding upstream 28151 83743738 ~ 83744223 (+)
G93512 NA non-coding upstream 28959 83743183 ~ 83743415 (+)
LOC110530841 LOC106613168 non-coding upstream 49113 83721859 ~ 83798056 (+)
G93414 NA non-coding upstream 54305 83676068 ~ 83718069 (+)
G93523 NA non-coding downstream 1631 83774552 ~ 83775050 (+)
G93524 NA non-coding downstream 3059 83775980 ~ 83776406 (+)
G93525 NA non-coding downstream 3626 83776547 ~ 83776901 (+)
G94379 NA non-coding downstream 28697 83801618 ~ 83802349 (+)
G94401 NA non-coding downstream 99587 83872508 ~ 83935450 (+)
G93362 NA other upstream 438798 83333266 ~ 83333576 (+)
G93204 NA other upstream 682442 83088531 ~ 83089932 (+)
G92575 trmt13 other upstream 1590578 82180946 ~ 82181796 (+)
G94463 NA other downstream 272390 84045311 ~ 84048149 (+)
LOC110532822 LOC106577256 other downstream 609836 84373236 ~ 84410052 (+)
G95702 NA other downstream 1367219 85140140 ~ 85141006 (+)
G95821 NA other downstream 1461900 85234821 ~ 85235394 (+)
G96133 NA other downstream 1864826 85637747 ~ 85638055 (+)

Expression


Co-expression Network