XLOC_020369 (si:dkey-78l4.4)


Basic Information

Item Value
gene id XLOC_020369
gene name si:dkey-78l4.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 19415080 ~ 19417750 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040445
TGTCTTTATGATGACCATCACCATCATCTCTCTGCTCCTGCTGGTTTCTCTGCTGCCACACATGACCTTCACTGCTCATGTGGGTATAGTGGATGGCAGGAAAGCAAAACCTCACTCCAGACCTTACATGGTTTCTATTCAATCAAATGACAGTCATGTCTGTGGTGGATTCCTCATTACTGAACAGTTTGTCTTGACTGCTGCACATTGCTGGAATGAaAGAGAGGTTCTGACGGTTTTGGTTGGAGCCCATAAACTTAGTAGGAGCAAGTGTTTGGACCGTTGTGAAGTGGAGCGCTACTTCAATTCGAAATATAAACCGCATCTTAATCGGAATGACATCATGCTTTTGAAATTAAAGAAAAAGGTCAGACTGAGCAAGAATGTTGGACTGATATCATTACCGAAGAATGGAGAAGATGTTAAAGCAGATACTCTCTGTAGTGTTGCTGGTTGGGGAACACTGTGGAAAAATGGACCAAAGCCAGATCGTCTAATGGAAGCAAACACAAGTATAGTAAATGATGCAGAGTGTAAACAGAGATGGGGATCTGATTATAAGGCCTCAAAGATGATCTGTGCTTATGGCCATGGCGGATCCTGCAATGGGGATTCAGGAGGTCCTTTGGTTTGTAATAACACTGCTGTTGGAGTCACAGCTTTCTGTGACCGTTATCAATGTAATTCACGTTTGCTTCCTAATGTGTATACTAAGATTTCAGCATATCTTAAATGGATCCACAAAGTAATTGGAAATATGTGAtttcatgaaaataaaaaggaGAAGAAGTtctttaataaatcattaatc

Function

symbol description
si:dkey-78l4.4 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis.

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008236 serine-type peptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-836 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis.

Ensembl:

ensembl_id ENSDARG00000095438

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040445 True 811 mRNA 0.41 5 19415080 19417750

Neighbor

gene id symbol gene type direction distance location
XLOC_020368 si:dkey-78l4.2 coding upstream 6979 19405517 ~ 19408101 (+)
XLOC_020367 si:dkey-21e2.12 coding upstream 47634 19365220 ~ 19367446 (+)
XLOC_020366 si:dkey-21e2.16 coding upstream 101342 19311411 ~ 19313738 (+)
XLOC_020365 si:dkey-21e2.15 coding upstream 123819 19289970 ~ 19291261 (+)
XLOC_020364 si:dkey-21e2.14 coding upstream 129780 19283978 ~ 19285300 (+)
XLOC_020370 si:dkey-78l4.6 coding downstream 36072 19453822 ~ 19455139 (+)
XLOC_020371 si:dkey-78l4.7 coding downstream 56054 19473804 ~ 19476271 (+)
XLOC_020372 si:dkey-78l4.8 coding downstream 60390 19478140 ~ 19482177 (+)
XLOC_020373 si:dkey-21e2.3 coding downstream 68961 19486711 ~ 19491728 (+)
XLOC_020374 si:dkey-78l4.10 coding downstream 77246 19494996 ~ 19496507 (+)
XLOC_020360 BX927243.1 non-coding upstream 176854 19237031 ~ 19238226 (+)
XLOC_020351 NA non-coding upstream 818822 18560343 ~ 18596258 (+)
XLOC_020344 NA non-coding upstream 1110792 18243758 ~ 18304288 (+)
XLOC_020345 NA non-coding upstream 1123283 18291474 ~ 18291797 (+)
XLOC_020339 BX908731.2 non-coding upstream 1590507 17824459 ~ 17824573 (+)
XLOC_020380 BX510913.2 non-coding downstream 353948 19771698 ~ 19771812 (+)
XLOC_020381 BX510913.3 non-coding downstream 375369 19793119 ~ 19793233 (+)
XLOC_020382 NA non-coding downstream 421525 19839275 ~ 19839592 (+)
XLOC_020383 NA non-coding downstream 594046 20011796 ~ 20050276 (+)
XLOC_020385 BX005203.1 non-coding downstream 721775 20139525 ~ 20139592 (+)

Expression


Co-expression Network