G94374


Basic Information

Item Value
gene id G94374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 83794650 ~ 83798011 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU104048
ACAGGAATGCTGAATTTAGTATTTTCTCAAAACTGTCAAACTGATATACACCTTAGTTATTATGTACAGTCATTTTGTCAATCAGTTGCAAAATAACAAGACTGTTATCTACAAACCATGAATAGTACAGTAAAACTGTCAGTTCCACATGAAATGTGTATTTTATACAGTTTTATTCCAATAAAAACCTTTGAGTTTTAAAATGCTGGTGCTAGTTTTTCCTCCTTGATGTACATGTAGGTTACCACAGTTTTCAAGTCACACATAATGGTAGAACCAAGAAATCTTCAAGTGAAACAATTACAAAAGTTTATTATCTTACAAACTGTCTTATGTAAAGCTGGAAACATTTTAAAGTGACTGTTTTCTACCACATTATTAACTTGCAACGGCCTACATTCAATATAATGTAATAGACTATATATGTACTGCAGCTACTTTGTATAAAATGCATTCAATCTATGTGTCAACATTTATCTCAGAGGAAAAATCTAAGTATATGGTTTGACTTTGTCAATCTGTTGACAACATTATTGGAAGAAAGAGAGTTGTGTTAGGAGACTGTGTGTGCCCTAGTTGGGTTGAAGCCTGGGTAAATGAACAACCTCACACCTGagaaacaaagaaaaaacagacataaaaaaaaacatatatccAGATCTGTGTATTACTCAAATGAAAGCACCAGTGAAATGTGCTTTATCTGCATTGAGCTGCATTAGAGCCAGCATATACTGAGACCGATCAATACAACAGATGCCTAATCAATTGCAGAATTAGTGAATGGGCCCATATTTACATGGTTATGATGGACTAATGTGAGCATTGATGAATACCCTACATGGTTGCCCCCTATTAAAGCAGGTTTATACTGTATACTGCAGAGGTCTACTGTCTGACTCAATACGTGATAGACCTAGAACTTATGATGAAAAGATGCAGAGAATTGATGCTACTCTGTAACTCTGCTCAAGTTGACCAGTGACAAGATTGAAGTACTGTAGTACATAATGCATTCAGGACAGAGATGGTAGAGCACAAAGGTATGGCAGGCCCATCCAGAAGGGAAACAGCAAATGCTAGTCATGCAAAAAGCATCATAACATCACCCCTAGAATAAACACAGGCTTTGTCAGTGCAGCATCACATTTTGACGAGTTAGCACCATCAGAAAGTAACTACATTTCCACCCTGAAACGGTATGCCACAAGCATTGAGGTTGATTCTATTTCAAAAGCCTTCTATCCAGGATTTTCAAATGAATTTGAATGAATAAGGTTGAATTGGAAAATTCTCTCTGAATATTACCGTTATTTTCTGAAATGACACGAgttaaccccaaccctgtatgCCACATTCAGACACCATGTGAAACAGTTATGTAAATGGTATGTAAACAACGTTTTAACAACATTTCAACACTGTTACAGCATCTGAAATGATCTGAGGAGTGTTTTATTCTGTCAGAGCAGCTTCACCCAAAGAGTGAAGACGAGGCAATGAGAAACAACAAAGGATTTGGTTGGTTTTCTTTCCACTTGTATAATGTATTTATACCCAGTATATGGACAAACATAAGTGCCAATCAATGCCCTAGTCAGTtaaaaagagaggatagagatgcTGTCAGCGCCTGTAAGAAACATACAGTAATATAGTCACCATTTCTGAACAGGTTTTATGTGGTCTTTTCAGCTGTGTCTGTATCAAAAACAGACAAGTCCTATTTAAAACACTCTGGAAGTTCAGACAGTGAACCAGACCTGGGTtaaaatactatttcaaatatcTCAATGACTTTCCCATACATTCAAAGTAATTATTTGAAAAGACAAGTAGTTGCATCTGGAAATTtggaaagtatttgaaaatactcaaatacaTTTTAAATAccagatactcaaatacacatgtatttgaacccaggtcttcaGTGAACATACTGTACATGGTTATCCAGATTCATAAAAATTAAGTGTCGTTGAAAACAAGCACCATAATCTGACACAATCTTTATATGCAGCATTTCATAATTGCTTAGTAAGCCAGTTTTTTTTGTGAGACTGATATGCAATTTATAATGTTACAAATTCATAGTTGAATAAAATCATTCTACAACAAAAAAACGAACAGGTTTCAAACAAGCTGTCGGATATATCTCTCTATCTGTACATATTGGAACGGGACCTTTTTCAagttatgaaaaataaaaaagtgCTTTTTCAATATGTCATCATATATCTGTACGTTTAACAAAAAGACTAAAACGATCCAGCCCAAAACAAGGTAGTAAAGTTCCTTCATGACCACCAATAGAGGAACGGGAAGAGAAGGAAAAGCACCATGCTACATGGGTACATTTTGTTCACATAAAACTAGAGTAAATGTGTGTAGTCTAGTCTTACATACTGTGtaatatgtggtgtgtttatcGAAAGTTGCTGCTACAGATGGCACCATTACATGATCAATCATTGATAAAACTCCTTTTGTGAAAAGAGCACTCTTGGCTGAAACAAAGACCATAGAGACTTGACATGAGTGTTTACTAGTGTAAAATGCTGGATGACAGCAAAATTGCAGTAAACAGGCTTGCAtcaagaaataaaataaaaaaatagtttttgAAAAATGGTCAGAATAAATAATCACATCTTGTTTGTTCTTATTAATCAAGTTGTATTTAAAACCAgtttaaaaacatatttaaaattgGTTCTGAGCACCATCTCTTTACATGAAAAAACCAGACCCCAAAAATCATCACCAAACACTAAAAGTCACAGTTAAAAACCCACAAACGATATTCTTCCTCATCACTTTGAAAGCAGAGAtgaagaaaaacaaaaataaacagacaTACGTTTGGAAAAAGtaacacaatgaaataacacagaaaAAGGAGATTAGAAGTGTAAAGTTGATTGAGGTAAGGCAGTAGcacagggtggtgtgtgtgtgtgtgtgtgttaaaatgtCATCGCTGTATGTgtctgtgagtgaatgtgtgcctgtgtacgtgtgtgtacataACAGTATCATGTCCAGCGGTTGTAGGGGCCCGTGACCTGTGTCAGAGCATAAGGGGACACAGTGACCACCCCATCCCGCGCTACGGTCACCGCCTGCCGGGTAGGAACCTTCAACACCCCTTTCTTCTCCTCCGGGccctcctcttctacctcctc

Function

NR:

description
methylcytosine dioxygenase TET2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104048 True 3188 lncRNA 0.36 2 83794650 83798011

Neighbor

gene id symbol gene type direction distance location
LOC110530770 slc25a16 coding downstream 72736 83713352 ~ 83721914 (-)
LOC110532793 lox5 coding downstream 93194 83676064 ~ 83701456 (-)
LOC110530724 anx11 coding downstream 385350 83386983 ~ 83409300 (-)
LOC110530648 LOC106577192 coding downstream 420027 83272529 ~ 83374623 (-)
LOC100301648 LOC106577193 coding downstream 527487 82949609 ~ 83267163 (-)
LOC110530866 nfu1 coding upstream 28938 83814162 ~ 83851846 (-)
si:ch211-198a12.6 LOC106577248 coding upstream 153046 83951057 ~ 83956958 (-)
LOC110532804 NA coding upstream 168154 83966165 ~ 83967505 (-)
LOC110530927 LOC106577245 coding upstream 233543 84031554 ~ 84104730 (-)
LOC110530947 LOC106577244 coding upstream 299616 84097627 ~ 84110671 (-)
G94372 NA non-coding downstream 3084 83791307 ~ 83791566 (-)
G94370 LOC106577185 non-coding downstream 8253 83786173 ~ 83786397 (-)
G94369 NA non-coding downstream 8935 83785368 ~ 83785715 (-)
G94368 NA non-coding downstream 10234 83784093 ~ 83784416 (-)
G94367 LOC100846954 non-coding downstream 11258 83783104 ~ 83783392 (-)
G94656 LOC106577249 non-coding upstream 87091 83885102 ~ 83885935 (-)
G94655 NA non-coding upstream 90086 83888097 ~ 83889981 (-)
G94630 NA non-coding upstream 150891 83948902 ~ 83950168 (-)
G94693 NA non-coding upstream 160597 83958608 ~ 83958847 (-)
G94201 NA other downstream 308713 83484056 ~ 83485937 (-)
LOC110532782 LOC106577197 other downstream 1492803 82291777 ~ 82301867 (-)
G92566 NA other downstream 1632907 82160407 ~ 82161743 (-)
LOC110530475 eif4ebp2 other downstream 2177326 81607478 ~ 81629726 (-)
G94613 NA other upstream 3321 83801332 ~ 83802471 (-)
LOC110531033 LOC106577242 other upstream 360812 84157529 ~ 84256949 (-)
G94821 NA other upstream 405476 84203487 ~ 84204464 (-)
LOC110532813 LOC106613040 other upstream 493749 84291760 ~ 84331700 (-)
G95494 NA other upstream 930853 84728864 ~ 84729423 (-)

Expression


Co-expression Network