G94539


Basic Information

Item Value
gene id G94539
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 84170461 ~ 84170697 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU104236
CTCTCTGGCAGCCCGGCAGTGTCGCTGCTCCTGATGGGTCCGGCCAGAGATGAGGCTGCTGACGGAGCCCATGGTGGCTCCGGGGACAAAGGGGTCACAGGGCCCTCCGACGACAGGGGAGAGGGTGACGATATGGAGGCTTGTGGGAGGCTTGGGGTGGTCAGTCACAGACACAGGCAGGGTCTGAACCAGAGCCATGTTACCTGGACAACACCAGACATACACCCAACAcactct

Function

NR:

description
leucine zipper putative tumor suppressor 2 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104236 True 237 lncRNA 0.62 1 84170461 84170697

Neighbor

gene id symbol gene type direction distance location
LOC110531025 NA coding upstream 18334 84133655 ~ 84152127 (+)
LOC110531002 NA coding upstream 58376 84108408 ~ 84112085 (+)
LOC110530965 fam213a coding upstream 73111 84082990 ~ 84097350 (+)
zgc:154058 LOC106577246 coding upstream 139439 83977118 ~ 84031022 (+)
LOC110530893 LOC106577247 coding upstream 218864 83903782 ~ 83951597 (+)
LOC110532822 LOC106577256 coding downstream 202539 84373236 ~ 84410052 (+)
LOC118966004 NA coding downstream 239949 84410646 ~ 84413177 (+)
LOC110531070 LOC106577256 coding downstream 260131 84430828 ~ 84439198 (+)
LOC118936696 LOC106577255 coding downstream 279530 84450227 ~ 84455456 (+)
LOC110531089 LOC106577256 coding downstream 310310 84481007 ~ 84483676 (+)
G94529 NA non-coding upstream 48368 84121814 ~ 84122093 (+)
G94458 NA non-coding upstream 69072 84097633 ~ 84101389 (+)
G94480 NA non-coding upstream 96828 83992433 ~ 84073633 (+)
G94540 NA non-coding downstream 1856 84172553 ~ 84173042 (+)
G94544 NA non-coding downstream 8656 84179353 ~ 84179670 (+)
G94548 NA non-coding downstream 23126 84193823 ~ 84194152 (+)
G94551 NA non-coding downstream 26303 84197000 ~ 84197308 (+)
G94555 NA non-coding downstream 34040 84204737 ~ 84204971 (+)
G94463 NA other upstream 122312 84045311 ~ 84048149 (+)
LOC110530763 LOC106577187 other upstream 620871 83511117 ~ 83667671 (+)
LOC110530741 LOC106577189 other upstream 697237 83452248 ~ 83484011 (+)
G93362 NA other upstream 836885 83333266 ~ 83333576 (+)
G93204 NA other upstream 1080529 83088531 ~ 83089932 (+)
G95702 NA other downstream 969443 85140140 ~ 85141006 (+)
G95821 NA other downstream 1064124 85234821 ~ 85235394 (+)
G96133 NA other downstream 1467050 85637747 ~ 85638055 (+)
G96577 NA other downstream 2240510 86411207 ~ 86413212 (+)

Expression


Co-expression Network