XLOC_020382



Basic Information


Item Value
gene id XLOC_020382
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 19839275 ~ 19839592 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00041895
GTTTCAGTGTATAATGAAAAGCTACTAAACTGAATTAACATTTTGCTCTTGCATTTTTCGTCTCTATAAGTGTTCACAAAATGCATGTTGCTCatcaaaaaagatttaaaacaacTATTAAATTACAACTGATgactaataaattaattattcacccCAAAAGTAAATGTCTATCATTATTTATTACTGAGTCTCATGCTCTTCTGTAATCCCATGACTTTTTTTTCCCATGAGTTTTTCCCTCAGTAGTTTATGTTCCTTCCAGAACACCATTccctgcattcatttattcatccagaAAGGAGACAGATAAAACAC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00041895 True 318 lncRNA 0.31 1 19839275 19839592

Neighbor


gene id symbol gene type direction distance location
XLOC_020381 BX510913.3 coding upstream 46042 19793119 ~ 19793233 (+)
XLOC_020380 BX510913.2 coding upstream 67463 19771698 ~ 19771812 (+)
XLOC_020379 rgmd coding upstream 192854 19640309 ~ 19646421 (+)
XLOC_020378 hsd11b1la coding upstream 276820 19552987 ~ 19562455 (+)
XLOC_020377 BX936298.3 coding upstream 295470 19538626 ~ 19543805 (+)
XLOC_020383 NA coding downstream 172204 20011796 ~ 20050276 (+)
XLOC_020384 eef2a.1 coding downstream 295851 20135443 ~ 20143425 (+)
XLOC_020385 BX005203.1 coding downstream 299933 20139525 ~ 20139592 (+)
XLOC_020386 eef2a.2 coding downstream 305444 20145036 ~ 20155026 (+)
XLOC_020387 BX005203.2 coding downstream 312333 20151925 ~ 20151981 (+)
XLOC_020360 BX927243.1 non-coding upstream 601049 19237031 ~ 19238226 (+)
XLOC_020351 NA non-coding upstream 1243017 18560343 ~ 18596258 (+)
XLOC_020344 NA non-coding upstream 1534987 18243758 ~ 18304288 (+)
XLOC_020390 NA non-coding downstream 406880 20246472 ~ 20247476 (+)
XLOC_020391 NA non-coding downstream 408317 20247909 ~ 20259347 (+)

Expression



Co-expression Network