XLOC_020383


Basic Information

Item Value
gene id XLOC_020383
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 20011796 ~ 20050276 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042130
cagaaacacacaaaatgattagTCGTTGATTATTCCTCTGAGATGGAGAAAAATACGAGTGTTTTGGGTTGATATATTCTGTCaagaaaacaaattcctcgtatttGTAAACATACCTGGCAAAGCTCTTTCAGATAAACAGACGCTCAAGTTCACGCGGCAGCATGTTTGTTTAGAGGGCTACATCCGGGAGGCACGgaggatcacgggactgatcatgacgcaAAGATGAcggtca

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042130 True 238 lncRNA 0.43 2 20011796 20050276

Neighbor

gene id symbol gene type direction distance location
XLOC_020382 NA coding upstream 172204 19839275 ~ 19839592 (+)
XLOC_020381 BX510913.3 coding upstream 218563 19793119 ~ 19793233 (+)
XLOC_020380 BX510913.2 coding upstream 239984 19771698 ~ 19771812 (+)
XLOC_020379 rgmd coding upstream 365375 19640309 ~ 19646421 (+)
XLOC_020378 hsd11b1la coding upstream 449341 19552987 ~ 19562455 (+)
XLOC_020384 eef2a.1 coding downstream 85167 20135443 ~ 20143425 (+)
XLOC_020385 BX005203.1 coding downstream 89249 20139525 ~ 20139592 (+)
XLOC_020386 eef2a.2 coding downstream 94760 20145036 ~ 20155026 (+)
XLOC_020387 BX005203.2 coding downstream 101649 20151925 ~ 20151981 (+)
XLOC_020388 hmg20b coding downstream 119076 20169352 ~ 20181597 (+)
XLOC_020360 BX927243.1 non-coding upstream 773570 19237031 ~ 19238226 (+)
XLOC_020351 NA non-coding upstream 1415538 18560343 ~ 18596258 (+)
XLOC_020390 NA non-coding downstream 196196 20246472 ~ 20247476 (+)
XLOC_020391 NA non-coding downstream 197633 20247909 ~ 20259347 (+)
XLOC_020392 NA non-coding downstream 210955 20261231 ~ 20265527 (+)

Expression


Co-expression Network