XLOC_020386 (eef2a.2)


Basic Information

Item Value
gene id XLOC_020386
gene name eef2a.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 20145036 ~ 20155026 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040474
GGTAGGCGGCGTGAAAGTGCATTCACTGTTGAGTGAATGCAAAAACATTAGACAAAATGGAGAACTTCAATGTAGACCAGATCCGTGCCACCATGGACAAGAAGTCCAACATCCGTAACATGTCTGTAATAGGAGCTTTTGATCACGGCAAATCAACTTTGACAGATTGGCTGGTGTCAAAAGCTGGTATCGTCAGCTCAGCCTGTGCTGGAGAAACCCGATTCATGGATACGAGGCGTGATGAACAAGAGCGTTGCATCACCATCAAGTCAACTGCTATCTCCATATTCTATGAGCTTGCTGATAAGGATTTGGCTTTCATTAAAGAGTGCAAAGATGGCTCCGGCTTCCTCCTCAACCTGATTGACTCCCCTGGGCATGTTGACTTCTCTTCAGAAGTTACAGCTGCACTGCGTATCACAGATGGAGCATTGCTGGTGGTGGATTGTGTGTCTGGTGTGTGCTTACAGACAGAGACTGTGCTCAGACAGGCCATTGGTGAGAGGATTAAACCAGTTTTGATGATTAACAAAATGGATCGAGCTTTGCTCGAGCTACAGTTGGTCCCTGAAGAGCTGTACCAGATCTTTCAGCGCATTGTTGAGAAAGTCAACGTGACCATCTCCACCTATGCTGAGGATGAGAAAGGCCCTATGGGCAACGTCATGATTGATCCTGTCGTTGGTAATCTTGCCTTTGGATCTGGACTGCATGGATGGGCCTTCACTTTGAAGCAGTTTGCAGAGCTCTATGTGAAAAAGTTCGCTGGTAAAGCTCAGCTGAGACCTGAAGAGTACATCAAGAAGGTGGAGGACATGATGAAGAAACTTTGGGGCAACAGCTACTTTGACTCTACTACTGGCAAGTTCAGTGAGTCTGCGACATCCCCAAATGGCAAGAAGCTTCCCAGGACTTTTGTTCAACTAGTCCTGGACCCCATCTTCAAAGTATTTGATGCCATCATGAACTTCAAAAAGGAAGAAACTGCAAAGCTGATTGAGAAGATGGGCATCAAGCTAGATGCAGAGGAGGAGAAGATGGAGGGCAAACTCCTACTGAAGGCTGTGATGCGCCGCTGGCTGCAGGCTGGAGAGGCTCTGCTTCAGATGATCACCATCCACCTGCCCTCACCGGTTACTGCCCAGATTTACCGCTGTGAGCTGCTGTATGAAGGACCTGGAGATGATGAGGCTGCCATGGGCATCAAGAATTGTGACCCTAAAGCACCTCTCATGATGTACATTTCTAAAATGGTACCAACATCTGACAAAGGTTGTTTTTATGCGTTTGGTCGCGTCTTCTCTGGCTGTGTCTCCACTGGCCTGAATGTGCGCATTATGGGGCCCAACTTCACCCCTGGAAAAAAGGATGATCTTTACCTGAAACCCATCCAAAGgACCGTTCTAATGATGGGTCGCTACGTTGAACCCATTGAAGATGTGCCCTGCGGCAATATTGTAGGTCTGTTAGGGGTGGATCTGTTTTTGGTAAAGACTGGAACCATCACTACTTTCACAAAAGCCTACAATATGCGTGTGATGAAGTTTAGTGTCAGTCCTGTGGTGAGAGTGTCCGTGGAGGTCATGGACCCTGCTGACCTTCCTAAACTGGTGGAGGGATTGAAGCATCTGGCCAAGTCAGATCCCATGTTGCAATGCATCTTCGAGGATTCTGGTGAGCATATCATTGCTGGAGCTGGTGAGCTTCACTTGGAGATTTGCCTTAAGGATCTTGAAGAGGTCCATGGTCTCAAGAAATCCGATCTATTTGCTACCTACAGAGAGACAGTCAGTGATGGCTCCAAAAAAATGTGCCTTGCCAAGACCCCAAACCAGCAAAGTCGTCTCTTCTTTAAAGCCTGTCCTCTGGCTGATGGTCTTGCAGAAGATATTGATAAGGGTCGGGTCACTGCCAGCCAGGAGATGAATGCCCGTGCCCAATACCTTGCTGAAAACTATAAGTGGGAAGTGACTGAAGCTCGTAAGATCTGGTGCTTTGGCCCTGAGGGAACTGGACCCAACATCTTGGTAGATTTGACCAAGAGAGTGCAATACTTAAATGAGATTAAGGACAGTGTGATTGCTGGATTTCAGTGGGTCACTAGAGAGGGAATCTTGTGCGCAGAGAACATGCGTGGCATTCGCTTCGACATTCATGATGCAACTTTGACTTCTACTGCCATTCACCGTGGTCCAGGTCAAGTGATTACTGCAACCCGCCGAGTGCTTTATGGCTGTCAGCTCACAGCTGAACCAAGGCTTAGTGAGCCGGTATACCTGGTGGAGATGCAGTGCCCAGAGTCAGTTATTGGTATTATTCATGCTGTACTGGTCAAGAGGCGTGGAGTAGTGTTTTTAGAGTCCCAGGTTACGGGAACTCCTATTTATTTGCTCAAGGCTTACTTGCCTGTCAGTGAGTCATTTGGTTTTACAGCTGACCTTTGTGCCAACACATCTGGCCAAGCCTTCTCACAGTGTGTGTTTGATCATTGGCAGATCATGCCTGGAGACCCATTGAATACTACCTCCAAAACTGCTCATATTATGGCTGACATACGAAAGCGCAAGGGCTTGCCAGAAGCCAATCTAGCTTTACATCGCTTCTTGGACAAATTTTAGGTTTACTGCACAGACTTTAAATCTTGTATTCAAGAACTTGAACCTTTTTTAAGTCAGACCACCCTATAATTCCCacaaaaaacaacactttttagAGAATAAACAGTTAATTTTCAAATGGTTCAGATGTGttaaaccaggggtggccaatcctgttcttggagagctaccttcctgcagatttcagttgctacccatatcaaacacacctgaaccaattaattaggatctaaacaccatgtgataattataggcaggtgtgtttaatatgggttgtaactgaaatctgcaggaaggtggctctccaggaacaggattggacACCCCTGTGTTAAACAGTTCAACACATCATTCCTAATAATGAACTGGTAGGTTCTCTGAAAATGACCAAGTTTAATTCCTCTGTCTGATCTCAAACCTATAATTTTATTGGCTCATGTATGAAAAATGGCAAGAGATCAACCTGAGCATTAATGAAAAGCACTTTCCAAATTAAATTTTCAGACCAGGCATGACCAAACTGTA

Function

symbol description
eef2a.2 Predicted to enable GTPase activity; ribosome binding activity; and translation elongation factor activity. Predicted to be involved in translational elongation. Predicted to act upstream of or within translation. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in glaucoma and spinocerebellar ataxia type 26. Orthologous to human EEF2 (eukaryotic translation elongation factor 2).

GO:

id name namespace
GO:0006414 translational elongation biological_process
GO:1990904 ribonucleoprotein complex cellular_component
GO:0005829 cytosol cellular_component
GO:0003924 GTPase activity molecular_function
GO:0043022 ribosome binding molecular_function
GO:0005525 GTP binding molecular_function
GO:0003746 translation elongation factor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-348 Predicted to enable GTPase activity; ribosome binding activity; and translation elongation factor activity. Predicted to be involved in translational elongation. Predicted to act upstream of or within translation. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in glaucoma and spinocerebellar ataxia type 26. Orthologous to human EEF2 (eukaryotic translation elongation factor 2).

Ensembl:

ensembl_id ENSDARG00000042065

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040474 True 3143 mRNA 0.46 13 20145036 20155026

Neighbor

gene id symbol gene type direction distance location
XLOC_020384 eef2a.1 coding upstream 1611 20135443 ~ 20143425 (+)
XLOC_020385 BX005203.1 coding upstream 5444 20139525 ~ 20139592 (+)
XLOC_020383 NA coding upstream 94760 20011796 ~ 20050276 (+)
XLOC_020382 NA coding upstream 305444 19839275 ~ 19839592 (+)
XLOC_020381 BX510913.3 coding upstream 351803 19793119 ~ 19793233 (+)
XLOC_020388 hmg20b coding downstream 14326 20169352 ~ 20181597 (+)
XLOC_020389 unc13a coding downstream 40254 20195280 ~ 20241232 (+)
XLOC_020390 NA coding downstream 91446 20246472 ~ 20247476 (+)
XLOC_020391 NA coding downstream 92883 20247909 ~ 20259347 (+)
XLOC_020392 NA coding downstream 106205 20261231 ~ 20265527 (+)
XLOC_020380 BX510913.2 non-coding upstream 373224 19771698 ~ 19771812 (+)
XLOC_020393 NA non-coding downstream 157777 20312803 ~ 20332834 (+)
XLOC_020395 NA non-coding downstream 278544 20433570 ~ 20434017 (+)

Expression


Co-expression Network