Gene
RNA
| Item | Value |
|---|---|
| gene id | G96435 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 85910355 ~ 85911694 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: regulating synaptic membrane exocytosis protein 1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU106468 | False | 408 | lncRNA | 0.24 | 4 | 85910355 | 85911694 |
| TU106469 | True | 207 | lncRNA | 0.22 | 2 | 85910355 | 85911492 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964521 | NA | coding | downstream | 278196 | 85630601 ~ 85632159 (-) |
| LOC110519057 | col19a1 | coding | downstream | 285639 | 85358222 ~ 85624716 (-) |
| LOC110510598 | LOC106594326 | coding | downstream | 610714 | 85247338 ~ 85299641 (-) |
| LOC110510599 | LOC106613623 | coding | downstream | 665914 | 85213382 ~ 85244441 (-) |
| LOC110516660 | tarbp1 | coding | downstream | 703086 | 85171944 ~ 85207269 (-) |
| LOC110513354 | LOC106569852 | coding | upstream | 310502 | 86222196 ~ 86223952 (-) |
| LOC110531234 | LOC106563028 | coding | upstream | 323545 | 86235239 ~ 86287517 (-) |
| LOC110531245 | LOC106562987 | coding | upstream | 387346 | 86299040 ~ 86349770 (-) |
| LOC110532855 | LOC106562987 | coding | upstream | 441986 | 86353680 ~ 86402164 (-) |
| LOC118966040 | LOC106592896 | coding | upstream | 690628 | 86602322 ~ 86650167 (-) |
| G96429 | NA | non-coding | downstream | 10246 | 85898573 ~ 85900109 (-) |
| G96423 | NA | non-coding | downstream | 25744 | 85884244 ~ 85884611 (-) |
| G96294 | NA | non-coding | downstream | 100249 | 85809043 ~ 85810106 (-) |
| G96261 | NA | non-coding | downstream | 166422 | 85743413 ~ 85743933 (-) |
| G96239 | NA | non-coding | downstream | 210724 | 85694536 ~ 85699631 (-) |
| G96438 | NA | non-coding | upstream | 4642 | 85916336 ~ 85916678 (-) |
| G96452 | NA | non-coding | upstream | 25481 | 85937175 ~ 85937455 (-) |
| G96454 | NA | non-coding | upstream | 30247 | 85941941 ~ 85943032 (-) |
| G96491 | NA | non-coding | upstream | 143298 | 86054992 ~ 86055225 (-) |
| G96493 | NA | non-coding | upstream | 154376 | 86066070 ~ 86066689 (-) |
| G96002 | NA | other | downstream | 558589 | 85346858 ~ 85351766 (-) |
| G95784 | NA | other | downstream | 751042 | 85157742 ~ 85159313 (-) |
| G95624 | NA | other | downstream | 930083 | 84979733 ~ 84980272 (-) |
| G97047 | LOC106577388 | other | upstream | 234315 | 86146009 ~ 86153321 (-) |
| G97176 | NA | other | upstream | 480867 | 86392561 ~ 86393089 (-) |
| G97251 | NA | other | upstream | 654783 | 86566477 ~ 86623311 (-) |
| G97308 | NA | other | upstream | 875363 | 86787057 ~ 86788052 (-) |
| G97535 | NA | other | upstream | 1382663 | 87294357 ~ 87294999 (-) |
