G96518


Basic Information

Item Value
gene id G96518
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 86140619 ~ 86140836 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU106568
agcatgtactgtatgacagagtcatgaAAAAGAGGAGAATGTTGAAatattgaagttgaaatggtgctggaatagtggagggcAGCTCCTGTTGCAGTAAgtctccgtggttctaaatccATAGCTGTTGAGTGGTCCAAAACGGTCAGAAACTTGAACTTGCTTTACCATACTGTAGTAGGTCACGTAGCTGTTTGTTTGTGTACTTCACCATACAg

Function

NR:

description
PREDICTED: secretogranin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106568 True 218 lncRNA 0.38 1 86140619 86140836

Neighbor

gene id symbol gene type direction distance location
LOC110514631 lmbrd1 coding upstream 277611 85641603 ~ 85863008 (+)
LOC110513561 LOC106560234 coding upstream 789195 85304274 ~ 85351424 (+)
LOC110511715 LOC106613617 coding upstream 959471 85177654 ~ 85181148 (+)
LOC110531368 slc35f3 coding upstream 980705 85012902 ~ 85159914 (+)
LOC118966016 NA coding upstream 1243938 84893278 ~ 84896681 (+)
LOC110531764 LOC106577387 coding downstream 1037 86141873 ~ 86153265 (+)
LOC110531757 LOC105008298 coding downstream 13420 86154256 ~ 86213640 (+)
LOC118966021 NA coding downstream 74742 86215568 ~ 86216902 (+)
LOC118966023 LOC106577312 coding downstream 259906 86400742 ~ 86409832 (+)
LOC118966024 LOC106562881 coding downstream 279278 86420114 ~ 86443279 (+)
G96517 NA non-coding upstream 1971 86138239 ~ 86138648 (+)
G96396 NA non-coding upstream 154337 85984316 ~ 85986282 (+)
G96392 NA non-coding upstream 161192 85976758 ~ 85979427 (+)
G96391 NA non-coding upstream 164817 85974870 ~ 85975802 (+)
G96371 NA non-coding upstream 199686 85939042 ~ 85940933 (+)
G96537 LOC106569852 non-coding downstream 80409 86221245 ~ 86223867 (+)
G96538 NA non-coding downstream 83269 86224105 ~ 86229345 (+)
G96502 LOC106563028 non-coding downstream 92384 86233220 ~ 86237454 (+)
G96133 NA other upstream 502564 85637747 ~ 85638055 (+)
G95821 NA other upstream 905225 85234821 ~ 85235394 (+)
G95702 NA other upstream 999613 85140140 ~ 85141006 (+)
LOC110532822 LOC106577256 other upstream 1730567 84373236 ~ 84410052 (+)
G94463 NA other upstream 2092470 84045311 ~ 84048149 (+)
G96577 NA other downstream 270371 86411207 ~ 86413212 (+)
G96630 LOC106592896 other downstream 319392 86460228 ~ 86572480 (+)
LOC118966033 LOC106562881 other downstream 351233 86492069 ~ 86495729 (+)
G97752 NA other downstream 1616205 87757041 ~ 87757546 (+)

Expression


Co-expression Network