G96566


Basic Information

Item Value
gene id G96566
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 86306315 ~ 86313153 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU106636
tgtCAGAGAAAGAGTTGAAAGAACTGAACTAGAATTTAACTGAATAACATTTTATTAAACTTAATTGTGAGAACATGTAAGAGCTAATATTGTAGATTTACAAAGTTACCCCCCCATAAAATactactgaggtgtgtgtgtgtgtctgtgtgcttgtgtgtgtgtgtgtgtgtgtgtttgtatgtgtgtatgggtgtgtgtctacgtgtgtgtgtgtgttaccttgaagACGAGCAGCATTAAGAGCAGTAGTAGAATGACCTGGATGCTGATGACAAACAGCTGGGAGATGAGATGGGCCAGCACAGTCTCCAACGAACTaacacctggagagagaggagacagagagggagaaggagaacgaaggagagagtgaaatagaggagaggagaaagggagggaaggagagaggagacagagagagagagaacgaaggagagagtgaaatagaggagcggagaaagggagggagagagagaacaaaggagagagtgaaatagagggaaagagagagagggagcgagagagagaggagacagcgagagagagaatgaagaagagagtgaaatagaggagagaagaaagggagggagagagagagagggagagaatagtggGACAGGAGAAAAGGAAGAGGAAGGCGGGGAGAAGACAATTTAATGTTCTGACAAACTGGCCCATGGTGATTTAACCAGATCTTCTGATTACTGGTCAGGATAATCCACCTCCCCCTAGTGGTCTGTACTGGTCACTACATAGATAATGACCACAAACTGTCAATGCATATAAACATGGAACGATATTCTCTATATCCaagccagttccactgtgttgtgtcattgttcccctctaatcagggactgatttagacctgggacaccaggtgggtgattcccctctaatcagggactggtttagacctgggacaccaggtgggtgattcccctctaatcagggactgatttagacctgggacaccaggtgggtgat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106636 True 990 lncRNA 0.45 3 86306315 86313153

Neighbor

gene id symbol gene type direction distance location
LOC118966021 NA coding upstream 89413 86215568 ~ 86216902 (+)
LOC110531757 LOC105008298 coding upstream 92675 86154256 ~ 86213640 (+)
LOC110531764 LOC106577387 coding upstream 153588 86141873 ~ 86153265 (+)
LOC110514631 lmbrd1 coding upstream 443307 85641603 ~ 85863008 (+)
LOC110513561 LOC106560234 coding upstream 954891 85304274 ~ 85351424 (+)
LOC118966023 LOC106577312 coding downstream 87589 86400742 ~ 86409832 (+)
LOC118966024 LOC106562881 coding downstream 106961 86420114 ~ 86443279 (+)
LOC118966027 LOC106592896 coding downstream 145915 86459068 ~ 86529078 (+)
LOC118966031 NA coding downstream 160238 86473391 ~ 86480688 (+)
LOC118966033 LOC106562881 coding downstream 178952 86492069 ~ 86495729 (+)
G96554 NA non-coding upstream 32233 86267126 ~ 86274082 (+)
G96543 NA non-coding upstream 61316 86244300 ~ 86244999 (+)
G96502 LOC106563028 non-coding upstream 68861 86233220 ~ 86237454 (+)
G96538 NA non-coding upstream 76970 86224105 ~ 86229345 (+)
G96537 LOC106569852 non-coding upstream 82448 86221245 ~ 86223867 (+)
G96573 NA non-coding downstream 18469 86331622 ~ 86332198 (+)
G96574 NA non-coding downstream 19292 86332445 ~ 86336027 (+)
G96611 NA non-coding downstream 81358 86394511 ~ 86394714 (+)
G96616 NA non-coding downstream 91183 86404336 ~ 86404868 (+)
G96578 NA non-coding downstream 103970 86417123 ~ 86417843 (+)
G96133 NA other upstream 668260 85637747 ~ 85638055 (+)
G95821 NA other upstream 1070921 85234821 ~ 85235394 (+)
G95702 NA other upstream 1165309 85140140 ~ 85141006 (+)
LOC110532822 LOC106577256 other upstream 1896263 84373236 ~ 84410052 (+)
G94463 NA other upstream 2258166 84045311 ~ 84048149 (+)
G96577 NA other downstream 98054 86411207 ~ 86413212 (+)
G96630 LOC106592896 other downstream 147075 86460228 ~ 86572480 (+)
G97752 NA other downstream 1443888 87757041 ~ 87757546 (+)

Expression


Co-expression Network