XLOC_020392



Basic Information


Item Value
gene id XLOC_020392
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 20261231 ~ 20265527 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042133
ATAGTTTCTAACATAACAGGCCCAAACAAAACTCATTAGAGTTCTCTTTAGGGCTTCGAAAAAAATTTGTGAATGCACCTTTTAACTACCATTGGTCTGATGATGTAACAGGTTGGTGTGGCTATGAAGCTCCACCTCTATTTCTTCTGTTGTCATTTCATAAAAAAGGGGCTTCACACTAAGTACAGGAATCTCAGTTATAGGAACTGGACACCAGTCTCAGAGGAGCAATTCCCCCTGGACAATTTTCTTTGTTGCTTGCACACCATCAGAAGAAACTCTGAAGCTACATAAGCAAAACAAAATCATCAACTGTGGACGCTGTGATAGATGCTGTGTTTTCATTGTGTGTTCTGGGTTTTATGATAATGGAGATGAAACATGGACTTCTGGGATTTAAAGAGCAAAAAAACGGACTAAATCACCTGTGACAGCTTGTAGAAAAGAACACAACACTGCAGACAAAGACAACAGCGTCCCCTGTCGGAGGGTGATGTTACGCTGATCCTCCTGACCTGTTCGGGTGAAGGGAAGACGGGTGAGCTGGAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042133 True 549 lncRNA 0.42 2 20261231 20265527

Neighbor


gene id symbol gene type direction distance location
XLOC_020391 NA coding upstream 1884 20247909 ~ 20259347 (+)
XLOC_020390 NA coding upstream 13755 20246472 ~ 20247476 (+)
XLOC_020389 unc13a coding upstream 19999 20195280 ~ 20241232 (+)
XLOC_020388 hmg20b coding upstream 79634 20169352 ~ 20181597 (+)
XLOC_020386 eef2a.2 coding upstream 106205 20145036 ~ 20155026 (+)
XLOC_020393 NA coding downstream 47276 20312803 ~ 20332834 (+)
XLOC_020394 foxq2 coding downstream 161643 20427170 ~ 20429374 (+)
XLOC_020395 NA coding downstream 168043 20433570 ~ 20434017 (+)
XLOC_020396 onecut3a coding downstream 195961 20461488 ~ 20473567 (+)
XLOC_020397 si:dkey-172o19.2 coding downstream 281085 20546612 ~ 20547407 (+)
XLOC_020387 BX005203.2 non-coding upstream 109250 20151925 ~ 20151981 (+)
XLOC_020385 BX005203.1 non-coding upstream 121639 20139525 ~ 20139592 (+)
XLOC_020383 NA non-coding upstream 210955 20011796 ~ 20050276 (+)
XLOC_020399 NA non-coding downstream 306307 20571834 ~ 20573960 (+)
XLOC_020402 CU693455.2 non-coding downstream 828324 21093851 ~ 21093965 (+)
XLOC_020403 NA non-coding downstream 869182 21134709 ~ 21141119 (+)

Expression



Co-expression Network