G96578


Basic Information

Item Value
gene id G96578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 86417123 ~ 86417843 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU106655
GGTTAGGTTgtgctgttgttgatgttgtACTATAGGGTTTCCCTTTTCATTTATCAAGAACAAGaccatttttatatattttttaaaacagtgCCTGTTAAATTAAATATTATAAGATGAATGCTTTTGAATTACAAGACTATCTATGAAGTTAGGTTTGATCAAGTTGTTCTCTCACCAATTGTCATCAGATGAGGATAAAGGATTTAGGATGAGAAGTTTGACCAGATCCAGTGTAAAAGAAGTCTGTCTGCTACAACATGTAAAGGGGTTGTTTCTGTCTGATGTAGCTAGtgttgtctgactgactgactcaggaAAGAAGATCCCTGGTTAACAGGTTCATTCTCTATTCTGGGTTTTCAACAGAGGATCCTGCATATAACCAGTCCCACAGGAGCAATACAactctttgtctgtgtcccaAAGGGCAATCTATTCCtttatatagagcactactttcaactggtcaaatgtagtgcactatgtagggaatagtgtgtcatttgggacacgcAGACTTATTAGACACTATTTCCTAACTGAATGAAACCAAGTTGAGTCATTCATGGAGAATTGTAACATTTTGCATTTAGACCATGTTTTGTTTGTGTCCATTAAAGGA
>TU106656
GGTTAGGTTgtgctgttgttgatgttgtACTATAGGGTTTCCCTTTTCATTTATCAAGAACAAGaccatttttatatattttttaaaacagtgCCTGTTAAATTAAATATTATAAGATGAATGCTTTTGAATTACAAGACTATCTATGAAGTTAGGTTTGATCAAGTTGTTCTCTCACCAATTGTCATCAGATGAGGATAAAGGATTTAGGATGAGAAGTTTGACCAGATCCAGTGTAAAAGAAGTCTGTCTGCTACAACATGTAAAGGGGTTGTTTCTGTCTGATGTAGCTAGtgttgtctgactgactgactcaggaAAGAAGATCCCTGGTTAACAGGTTCATTCTCTATTCTGGGTTTTCAACAGAGGATCCTGCATATAACCAGTCCCACAGGAGCAATACAactctttgtctgtgtcccaAAGGGCAATCTATTCCtttatatagagcactactttcaactggtcaaatgtagtgcactatgtagggaatagtgtgtcatttgggacacgcAGACTTATTAGACACTATTTCCTAACTGAATGAAACCAAGTTGAGTCATTCATGGAGAATTGTAACATTTTGCATTTAGACCATGTTTTGTTTGTGTCCATTAAAGGAGTAATTCCACTAGTTGTGCTCTCTTCCTCGTCAAACGTTTTCGTTTCTCATGCTTCTGTTAAAACGACTACTTCGTAGACCAATAAATGTGTCATC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU106655 False 625 lncRNA 0.37 1 86417123 86417747
TU106656 True 721 lncRNA 0.37 1 86417123 86417843

Neighbor

gene id symbol gene type direction distance location
LOC118966023 LOC106577312 coding upstream 7291 86400742 ~ 86409832 (+)
LOC118966021 NA coding upstream 200221 86215568 ~ 86216902 (+)
LOC110531757 LOC105008298 coding upstream 203483 86154256 ~ 86213640 (+)
LOC110531764 LOC106577387 coding upstream 264396 86141873 ~ 86153265 (+)
LOC110514631 lmbrd1 coding upstream 554115 85641603 ~ 85863008 (+)
LOC118966024 LOC106562881 coding downstream 2271 86420114 ~ 86443279 (+)
LOC118966027 LOC106592896 coding downstream 41225 86459068 ~ 86529078 (+)
LOC118966031 NA coding downstream 55548 86473391 ~ 86480688 (+)
LOC118966033 LOC106562881 coding downstream 74262 86492069 ~ 86495729 (+)
LOC118966725 NA coding downstream 119582 86537425 ~ 86553655 (+)
G96616 NA non-coding upstream 12255 86404336 ~ 86404868 (+)
G96611 NA non-coding upstream 22409 86394511 ~ 86394714 (+)
G96547 NA non-coding upstream 25157 86297635 ~ 86391966 (+)
G96582 NA non-coding downstream 1696 86419539 ~ 86419965 (+)
G96632 NA non-coding downstream 61341 86479184 ~ 86479961 (+)
G96631 NA non-coding downstream 64305 86482148 ~ 86596005 (+)
G96577 NA other upstream 3911 86411207 ~ 86413212 (+)
G96133 NA other upstream 779068 85637747 ~ 85638055 (+)
G95821 NA other upstream 1181729 85234821 ~ 85235394 (+)
G95702 NA other upstream 1276117 85140140 ~ 85141006 (+)
LOC110532822 LOC106577256 other upstream 2007071 84373236 ~ 84410052 (+)
G96630 LOC106592896 other downstream 42385 86460228 ~ 86572480 (+)
G97752 NA other downstream 1339198 87757041 ~ 87757546 (+)
LOC118966052 LOC106577294 other downstream 1503164 87920968 ~ 87928366 (+)

Expression


Co-expression Network