G97178


Basic Information

Item Value
gene id G97178
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 86417131 ~ 86417964 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU107378
GAAGAGAGCACAACTAGTGGAATTACTCCTTTAATGGACACAAACAAAACATGGTCTAAATGCAAAATGTTACAATTCTCCATGAATGACTCAACTTGGTTTCATTCAGTTAGGAAATAGTGTCTAATAAGTCTgcgtgtcccaaatgacacactattccctacatagtgcactacatttgaccagttgaaagtagtgctctatataaaGGAATAGATTGCCCTTtgggacacagacaaagagtTGTATTGCTCCTGTGGGACTGGTTATATGCAGGATCCTCTGTTGAAAACCCAGAATAGAGAATGAACCTGTTAACCAGGGATCTTCTTtcctgagtcagtcagtcagacaacaCTAGCTACATCAGACAGAAACAACCCCTTTACATGTTGTAGCAGACAGACTTCTTTTACACTGGATCTGGTCAAACTTCTCATCCTAAATCCTTTATCCTCATCTGATGACAATTGGTGAGAGAACAACTTGATCAAACCTAACTTCATAGATAGTCTTGTAATTCAAAAGCATTCATCTTATAATATTTAATTTAACAGGcactgttttaaaaaatatataaaaatggtCTTGTTCTTGATAAATGAAAAGGGAAACCCTATAGTacaacatcaacaacagcacA
>TU107379
ctcagcttGGCAGGGGCAGGACACAGACTCCCTTGTTTTCCTGATGGCTCGTTTTCAAGAGCTCCATACTGTGGTTCAGCCCTGTCAGAATGAAACACATTGAGCACCGGGTACATTCCAAGATGACACATTTATTGGTCTACGAAGTAGTCGTTTTAACAGAAGCATGAGAAACGAAAACGTTTGACGAGGAAGAGAGCACAACTAGTGGAATTACTCCTTTAATGGACACAAACAAAACATGGTCTAAATGCAAAATGTTACAATTCTCCATGAATGACTCAACTTGGTTTCATTCAGTTAGGAAATAGTGTCTAATAAGTCTgcgtgtcccaaatgacacactattccctacatagtgcactacatttgaccagttgaaagtagtgctctatataaaGGAATAGATTGCCCTTtgggacacagacaaagagtTGTATTGCTCCTGTGGGACTGGTTATATGCAGGATCCTCTGTTGAAAACCCAGAATAGAGAATGAACCTGTTAACCAGGGATCTTCTTtcctgagtcagtcagtcagacaacaCTAGCTACATCAGACAGAAACAACCCCTTTACATGTTGTAGCAGACAGACTTCTTTTACACTGGATCTGGTCAAACTTCTCATCCTAAATCCTTTATCCTCATCTGATGACAATTGGTGAGAGAACAACTTGATCAAACCTAACTTCATAGATAGTCTTGTAATTCAAAAGCATTCATCTTATAATATTTAATTTAACAGGcactgttttaaaaaatatataaaaatggtCTTGTTCTTGATAAATGAAAAGGGAAACCCTATAGTacaacatcaacaacagcacA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107378 False 643 lncRNA 0.37 1 86417131 86417773
TU107379 True 834 lncRNA 0.39 1 86417131 86417964

Neighbor

gene id symbol gene type direction distance location
LOC110532855 LOC106562987 coding downstream 14967 86353680 ~ 86402164 (-)
LOC110531245 LOC106562987 coding downstream 67361 86299040 ~ 86349770 (-)
LOC110531234 LOC106563028 coding downstream 129614 86235239 ~ 86287517 (-)
LOC110513354 LOC106569852 coding downstream 193179 86222196 ~ 86223952 (-)
LOC110531925 adgrb3 coding downstream 369955 85891577 ~ 86047176 (-)
LOC118966040 LOC106592896 coding upstream 184358 86602322 ~ 86650167 (-)
LOC118936335 LOC106592896 coding upstream 245551 86663515 ~ 86698225 (-)
LOC118966041 NA coding upstream 312967 86730919 ~ 86732537 (-)
LOC110518258 LOC105008825 coding upstream 365860 86783824 ~ 86864120 (-)
LOC118966043 NA coding upstream 508475 86926439 ~ 86954561 (-)
G97177 NA non-coding downstream 6729 86395905 ~ 86410402 (-)
G97163 NA non-coding downstream 71755 86344207 ~ 86345376 (-)
G97161 NA non-coding downstream 76361 86340306 ~ 86340770 (-)
G97156 NA non-coding downstream 89124 86326220 ~ 86328007 (-)
G97141 NA non-coding downstream 142861 86267122 ~ 86274270 (-)
G97191 NA non-coding upstream 1801 86419765 ~ 86420017 (-)
G97208 NA non-coding upstream 34636 86452600 ~ 86502883 (-)
G97224 NA non-coding upstream 48128 86466092 ~ 86538953 (-)
G97227 NA non-coding upstream 64143 86482107 ~ 86596907 (-)
G97217 NA non-coding upstream 103460 86521424 ~ 86526006 (-)
G97176 NA other downstream 24042 86392561 ~ 86393089 (-)
G97047 LOC106577388 other downstream 265792 86146009 ~ 86153321 (-)
G96002 NA other downstream 1065365 85346858 ~ 85351766 (-)
LOC110510598 LOC106594326 other downstream 1156599 85247338 ~ 85299641 (-)
LOC110510599 LOC106613623 other downstream 1191981 85213382 ~ 85244441 (-)
G97251 NA other upstream 148513 86566477 ~ 86623311 (-)
G97308 NA other upstream 369093 86787057 ~ 86788052 (-)
G97535 NA other upstream 876393 87294357 ~ 87294999 (-)
LOC110531505 LOC106597820 other upstream 1495338 87911053 ~ 87919678 (-)
pex13 LOC106592834 other upstream 1645498 88054545 ~ 88065123 (-)

Expression


Co-expression Network