G97224


Basic Information

Item Value
gene id G97224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 86466092 ~ 86538953 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU107443
ACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATTGAAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATTGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCTTACATTATGGGTCAGCTAGGACTCAGGTATGGAGGTAACATACATTATGGGTCAGCTAGAACTCAGGTATGGAGGTAACATACAT
>TU107444
ACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATTGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCTTACATTATGGGTCAGCTAGGACTCAGGTATGGAGGTAACATACATTATGGGTCAGCTAGAACTCAGGTATGGAGGTAACATACAT
>TU107445
ACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATTGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCTTACATTATGGGTCAGCTAGGACTCAGGTATGGAGGTAACATACATTATGGGTCAGCTAGAACTCAGGTATGGAGGTAACATACAT
>TU107446
ACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATTGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCTTACATTATGGGTCAGCTAGGACTCAGGTATGGAGGTAACATACATTATGGGTCAGCTAGAACTCAGGTATGGAGGTAACATACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107443 False 291 lncRNA 0.46 5 86466092 86538953
TU107444 False 250 lncRNA 0.36 3 86466092 86538753
TU107445 False 290 lncRNA 0.47 4 86466092 86538953
TU107446 True 250 lncRNA 0.44 3 86466092 86538953

Neighbor

gene id symbol gene type direction distance location
LOC110532855 LOC106562987 coding downstream 63928 86353680 ~ 86402164 (-)
LOC110531245 LOC106562987 coding downstream 116322 86299040 ~ 86349770 (-)
LOC110531234 LOC106563028 coding downstream 178575 86235239 ~ 86287517 (-)
LOC110513354 LOC106569852 coding downstream 242140 86222196 ~ 86223952 (-)
LOC110531925 adgrb3 coding downstream 418916 85891577 ~ 86047176 (-)
LOC118966040 LOC106592896 coding upstream 63369 86602322 ~ 86650167 (-)
LOC118936335 LOC106592896 coding upstream 124562 86663515 ~ 86698225 (-)
LOC118966041 NA coding upstream 191978 86730919 ~ 86732537 (-)
LOC110518258 LOC105008825 coding upstream 244871 86783824 ~ 86864120 (-)
LOC118966043 NA coding upstream 387486 86926439 ~ 86954561 (-)
G97191 NA non-coding downstream 46075 86419765 ~ 86420017 (-)
G97178 NA non-coding downstream 48128 86417131 ~ 86417964 (-)
G97177 NA non-coding downstream 55690 86395905 ~ 86410402 (-)
G97163 NA non-coding downstream 120716 86344207 ~ 86345376 (-)
G97161 NA non-coding downstream 125322 86340306 ~ 86340770 (-)
G97228 NA non-coding upstream 13517 86552470 ~ 86552902 (-)
G97210 LOC106592896 non-coding upstream 33216 86572169 ~ 86572869 (-)
G97255 NA non-coding upstream 33988 86572941 ~ 86575969 (-)
G97211 NA non-coding upstream 38807 86577760 ~ 86579800 (-)
G97256 NA non-coding upstream 41047 86580000 ~ 86581036 (-)
G97176 NA other downstream 73003 86392561 ~ 86393089 (-)
G97047 LOC106577388 other downstream 314753 86146009 ~ 86153321 (-)
G96002 NA other downstream 1114326 85346858 ~ 85351766 (-)
LOC110510598 LOC106594326 other downstream 1205560 85247338 ~ 85299641 (-)
LOC110510599 LOC106613623 other downstream 1240942 85213382 ~ 85244441 (-)
G97251 NA other upstream 27524 86566477 ~ 86623311 (-)
G97308 NA other upstream 248104 86787057 ~ 86788052 (-)
G97535 NA other upstream 755404 87294357 ~ 87294999 (-)
LOC110531505 LOC106597820 other upstream 1374349 87911053 ~ 87919678 (-)
pex13 LOC106592834 other upstream 1524509 88054545 ~ 88065123 (-)

Expression


Co-expression Network