G96674


Basic Information

Item Value
gene id G96674
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 86599515 ~ 86600903 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU106779
gttagggttaggtctgcataagggttagggttagggttaggtccaCATAAGGGtgcaaaaaaaatcattaaaTCACAAAAGCTGTGATGAAGGcggtgaggccgatacgtaagcttattaaagatcagtgatactatcaagagcagtgtgtggtttcctttatctttggaaaataaaatagatgacctacgcggaagattaaactatcaacgggacattcaaaactgtaacatcttatgcttcacggagtcgtggctgaacgacgacactatcaacatacagctgtctggttatacgctgtaccggcaggataccAGCTGCGTCTGGTGGTGGAGGACTATGTATTTTGGTGAATagcagctggtgcacgatatctaaggaagtttcgagctattgctcgcctgaggtagagtatctcatgataaccTGTAGACCtcactacctaccgagagagttttcatctgtattttttgtagctgtttacatactatcacagtcagaggctgggactaagacagcattgaatgagctatattacgccataagcaaacaagaaaacactcacccagTGTCACGAGACTGGGTTTGTGAGGtaagaatcaggcgcagagagttcCACAGGGAAAAAGTGCACTTTAATATGGCACCAAAATCCAatgcccaaaacacagggcgcGAAAaatactgaccaacccaaaacacagggtacaCGGTCTGGAGTACGAACACACCCAACGACAACAACACGTAACACAaaatcaatcccgcacaaaacaagggcgggttcACTAACCTTAAATAAGGAAGCCCATCAGAAAAACATAATTagacacaggtgcaactaataagacaaaacaaacagaaaaaggaaaagggatcggtggcggctagtaggccggtgacgacaaccgccgagcaccgcccgaacaggcaggggagccaacttctagtaggccggtgacgacgaccgccgagcaccgcccgaacaggcaggggagccaacttctagtaggcccggtgacgtcgaccgccgagcaccgcccgaacaggcaggggagcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106779 True 1060 lncRNA 0.45 2 86599515 86600903

Neighbor

gene id symbol gene type direction distance location
LOC118966035 LOC106592896 coding upstream 3944 86562981 ~ 86595571 (+)
LOC118966726 NA coding upstream 40252 86557726 ~ 86559263 (+)
LOC118966725 NA coding upstream 45860 86537425 ~ 86553655 (+)
LOC118966027 LOC106592896 coding upstream 70437 86459068 ~ 86529078 (+)
LOC110531632 slc1a4 coding downstream 135981 86736884 ~ 86756777 (+)
LOC110516875 LOC106577366 coding downstream 163384 86764287 ~ 86783717 (+)
LOC100135993 LOC100135993 coding downstream 769880 87370783 ~ 87373089 (+)
LOC118966047 adgrb3 coding downstream 875601 87476504 ~ 87645037 (+)
LOC118966730 NA coding downstream 1048026 87648929 ~ 87661492 (+)
G96631 NA non-coding upstream 3510 86482148 ~ 86596005 (+)
G96630 LOC106592896 non-coding upstream 27035 86460228 ~ 86572480 (+)
G96655 LOC106613263 non-coding upstream 32153 86518470 ~ 86567362 (+)
G96662 NA non-coding upstream 49723 86549405 ~ 86549792 (+)
G96673 NA non-coding downstream 13533 86614436 ~ 86637361 (+)
G96687 NA non-coding downstream 27037 86627940 ~ 86628418 (+)
G96688 NA non-coding downstream 27575 86628478 ~ 86629323 (+)
G96690 NA non-coding downstream 31546 86632449 ~ 86641456 (+)
G96693 NA non-coding downstream 38654 86639557 ~ 86686575 (+)
LOC118966033 LOC106562881 other upstream 103823 86492069 ~ 86495729 (+)
LOC118966024 LOC106562881 other upstream 160043 86420114 ~ 86443279 (+)
G96577 NA other upstream 186303 86411207 ~ 86413212 (+)
G96133 NA other upstream 961460 85637747 ~ 85638055 (+)
G97752 NA other downstream 1156138 87757041 ~ 87757546 (+)
LOC118966052 LOC106577294 other downstream 1320104 87920968 ~ 87928366 (+)
G98104 NA other downstream 1530135 88130944 ~ 88165405 (+)
LOC118966060 LOC106613898 other downstream 2036147 88608182 ~ 88744413 (+)
LOC118966061 NA other downstream 2040110 88551971 ~ 88647803 (+)

Expression


Co-expression Network