XLOC_020395



Basic Information


Item Value
gene id XLOC_020395
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 20433570 ~ 20434017 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00041896
tctagcaaccacctggcaacaccttagcaaccactcagaacaccctatcaaCCGCTAATAAAGTAACATGCCAATCCATGCTAGAAATATGCTCACCTATATGTAGCTATCTATCTATGCCGACTGTTTCAAACTTCCTTAAAACTActtcaattttttaaactttaaaactaccTCAAACTTTCAGACGAGGCttttttcaagccaccataaagtttgtctacggACTTTCCTTTTCTATTATAACTAATATTAAGATGAATTCTGAAGGATCCACTTTGAATCAGTAGAATAAATAATTAGATCTTAAAATACATTCACATAGATAACAGTGAGTCTACATTTAAGTATCacttcacaatatttttttgtaaaatacgtttattttataaaaagtataaatagcatttattattaacattattcaacaatttattaaaagagtcga

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00041896 True 448 lncRNA 0.30 1 20433570 20434017

Neighbor


gene id symbol gene type direction distance location
XLOC_020394 foxq2 coding upstream 4196 20427170 ~ 20429374 (+)
XLOC_020393 NA coding upstream 100736 20312803 ~ 20332834 (+)
XLOC_020392 NA coding upstream 168043 20261231 ~ 20265527 (+)
XLOC_020391 NA coding upstream 174223 20247909 ~ 20259347 (+)
XLOC_020390 NA coding upstream 186094 20246472 ~ 20247476 (+)
XLOC_020396 onecut3a coding downstream 27471 20461488 ~ 20473567 (+)
XLOC_020397 si:dkey-172o19.2 coding downstream 112595 20546612 ~ 20547407 (+)
XLOC_020398 nfil3-4 coding downstream 126024 20560041 ~ 20560787 (+)
XLOC_020399 NA coding downstream 137817 20571834 ~ 20573960 (+)
XLOC_020400 peak3 coding downstream 276417 20710434 ~ 20712654 (+)
XLOC_020387 BX005203.2 non-coding upstream 281589 20151925 ~ 20151981 (+)
XLOC_020402 CU693455.2 non-coding downstream 659834 21093851 ~ 21093965 (+)
XLOC_020403 NA non-coding downstream 700692 21134709 ~ 21141119 (+)
XLOC_020412 NA non-coding downstream 1235148 21669165 ~ 21766839 (+)
XLOC_020413 NA non-coding downstream 1352762 21786779 ~ 21787648 (+)

Expression



Co-expression Network