G96717


Basic Information

Item Value
gene id G96717
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 86677086 ~ 86679569 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU106834
gttctcagctagcctacctggttaaataaaggtgttctcagctagcctacctggttaaatatgcAATCTGGGTTAGGGAAAATAAAACCACTACTTACCCTTTTCTGCCTTGAGTTCATCTGCAAATATGTAGAGTAGATGGAAGACAGTGAGAACATCATCAACATGAACACTATAAGATGTAGTCTCTCTCTGGGACTCCTTGTCTCATATCACTTCTTTAATATCATACTATGGGATAAATCTAAATTGAGTTCCACACACCTAAATGAGTCTAGCTTACCTCTGTGTGTGAGACATCCTCTCTCCAATAGAGATCTACAACATTATCATTTACCTCTTAAATTCACTCAATACATGTGACAGGTATCAGTGATCCAGGTGTATCAGAGactacctctctctagtctagtggtCCTCTACAGCCTCAACACATCCTGTTCTAGAACATCAATCTATGGTCTGAAGATACTGACACTAATAAGGCACTGGGATATACCACTTCAAGTTTCCAGTTTCATTTGATgtatgtacgggatacacatggtattcACTGTccatgcttacttgcaggtttaACAATGCAATAACAATGAATATGTCAATTGGAAGCTGTGGCCTGCTTAGTGAATCTTTACAGTCGTGTGTAATCTGGGTTAGGGACAATAAAACCACTACTTACCTAGCTTCCTAGTGAGGTCATCTGTGAACATGTCGAGTAGATGCAAGACAGTGAGAACATCATTAACCTGAACACTAGAAGATGTAGTCTCTCTCTGGGACTCCTTGTCTCATATCACTTCACTAATGGCACAAATCCTAACTGAGTTCCACCACCTAAATGAGTCCAGCGTACCTTTGAGACAAATTCCCCAATAAAGATATTCTACCCTACCACCTCTTAATTTCATTCAATAAACATGTCAATTAAATGGTTTAGTCTGCGTTGTGAATCTTTACATTCATGTGTGTAATCTGGGTCAGGAACAATAAAACCACTACTTAACCTTTTGCATGTTGGGGgcagtatttttgtttttggctaaaaacgtacccatttgaaacatccccagaagctagaatatgcatataattgtcagattaggatagaaaacactctaaagtttccaaaactgtaaaaatattgtctgtgagtttaacagaactgatattgtaggcgaaaacctgaagaaaatccaatcaggaagtgcctcttattttgaggcactgttcctgttcctctgttcctatgcatgcctatcctccatttaaagggatatcaactaaattcatttttctatggcttccctaaggtgtcaacagtctttagacatagtttcaagcttttattttgaaaaatgagcgtgaaagatcacattgcgtaagtggataggtgggggctctcagagtgagttttgcactacagagtaaagcggccattgtttctcccggtgTTATTGAAAAATCTAcacacccggttgatatattatcgaatatatattttaaaaacaacctgaggattgattataaaaaacgtttgacatgtttctgtggacattatggatattatttggaatatacgtctgcgttgtcgtgagcacactttcctgtggatttctgaacataatgcgacaaacaaacggaggtattttgggtataaaaataatctttatggaacaaaaggaacatttgttgtgtacctgggagtctcgtgagtgaaaacatctgaagatcatcaaaggtaaacaattaatttgattgcttttctgattttcgtgacctagctacttaatgcttagtgtacataatgttatgttatgctatcgataaacttacacaaacgctttcgctgtaaagcataatttcaaaatctgagacgacaggtggattaacaaaaggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106834 True 1900 lncRNA 0.42 2 86677086 86679569

Neighbor

gene id symbol gene type direction distance location
LOC118966035 LOC106592896 coding upstream 81515 86562981 ~ 86595571 (+)
LOC118966726 NA coding upstream 117823 86557726 ~ 86559263 (+)
LOC118966725 NA coding upstream 123431 86537425 ~ 86553655 (+)
LOC118966033 LOC106562881 coding upstream 181357 86492069 ~ 86495729 (+)
LOC118966031 NA coding upstream 196398 86473391 ~ 86480688 (+)
LOC110531632 slc1a4 coding downstream 57315 86736884 ~ 86756777 (+)
LOC110516875 LOC106577366 coding downstream 84718 86764287 ~ 86783717 (+)
LOC100135993 LOC100135993 coding downstream 691214 87370783 ~ 87373089 (+)
LOC118966047 adgrb3 coding downstream 796935 87476504 ~ 87645037 (+)
LOC118966730 NA coding downstream 969360 87648929 ~ 87661492 (+)
G96708 NA non-coding upstream 6824 86669036 ~ 86670262 (+)
G96690 NA non-coding upstream 35630 86632449 ~ 86641456 (+)
G96673 NA non-coding upstream 39725 86614436 ~ 86637361 (+)
G96688 NA non-coding upstream 47763 86628478 ~ 86629323 (+)
G96687 NA non-coding upstream 48668 86627940 ~ 86628418 (+)
G96718 NA non-coding downstream 10433 86690002 ~ 86696180 (+)
G96719 NA non-coding downstream 11042 86690611 ~ 86696733 (+)
G96725 NA non-coding downstream 52813 86732382 ~ 86734815 (+)
G96726 NA non-coding downstream 55660 86735229 ~ 86735618 (+)
G96727 NA non-coding downstream 56276 86735845 ~ 86736045 (+)
G96630 LOC106592896 other upstream 216244 86460228 ~ 86572480 (+)
LOC118966024 LOC106562881 other upstream 237614 86420114 ~ 86443279 (+)
G96577 NA other upstream 263874 86411207 ~ 86413212 (+)
G96133 NA other upstream 1039031 85637747 ~ 85638055 (+)
G97752 NA other downstream 1077472 87757041 ~ 87757546 (+)
LOC118966052 LOC106577294 other downstream 1241438 87920968 ~ 87928366 (+)
G98104 NA other downstream 1451469 88130944 ~ 88165405 (+)
LOC118966060 LOC106613898 other downstream 1957481 88608182 ~ 88744413 (+)
LOC118966061 NA other downstream 1961444 88551971 ~ 88647803 (+)

Expression


Co-expression Network