G97312


Basic Information

Item Value
gene id G97312
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 86799028 ~ 86804675 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU107600
ttcttgtaattctctcaaccagcttcatgaggtagtcacctggaatgcatttcaattaacaggtgtgccttgttaaaagttcattcgtggaatttatttccttcttaatgtgtttgagacaatcagctgtgttgtgacaaggtagaggtggtatacagaagatagccctatttggtaaaagaccaagtccatattatgtcaagaacagctcaaataagcaaagagaaatgacgcatcattactttaagatatgaaggtcagtcaatctggaacattttaagaactttgaaagtttcttcaagtgcagtcacaaaaaccatcaagcgctatgatgaaactgcctctcatgaggaccgccacaggaaaggaatacccagagttacctctgctgcagaggataacttcataagagttaccagcctcagaaattgcagcccaaataaatgcttcacagagttcaagtaacagacgcatgaatcaggccttcgtggtagaattgctgcatagaaaccactactaaaggacaccaataagaagaagagacttgcttagtccaagaaacacgagcaagggacattagaccggtggaaatctgtcctttggtctgatgagtccaaatttcagatttttggtttcaagTAGCTGagcagatgatctccgcattgtgtggttcccaccatgaagcatggaggaggaggtgtgatggtgtattttg

Function

NR:

description
Transposable element Tc1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107600 True 715 lncRNA 0.41 2 86799028 86804675

Neighbor

gene id symbol gene type direction distance location
LOC118966041 NA coding downstream 66491 86730919 ~ 86732537 (-)
LOC118936335 LOC106592896 coding downstream 100803 86663515 ~ 86698225 (-)
LOC118966040 LOC106592896 coding downstream 148861 86602322 ~ 86650167 (-)
LOC110532855 LOC106562987 coding downstream 396864 86353680 ~ 86402164 (-)
LOC110531245 LOC106562987 coding downstream 449258 86299040 ~ 86349770 (-)
LOC118966043 NA coding upstream 121764 86926439 ~ 86954561 (-)
LOC110532959 LOC106577289 coding upstream 153223 86957898 ~ 87049090 (-)
LOC118966727 LOC106577289 coding upstream 357602 87162277 ~ 87166534 (-)
LOC118966728 LOC106577282 coding upstream 363210 87167885 ~ 87204885 (-)
LOC118966729 LOC106577282 coding upstream 402789 87207464 ~ 87230079 (-)
LOC110518258 LOC105008825 non-coding downstream 14720 86783824 ~ 86864120 (-)
G97290 LOC106560778 non-coding downstream 33043 86765724 ~ 86765985 (-)
G97287 NA non-coding downstream 38199 86760188 ~ 86760829 (-)
G97285 NA non-coding downstream 41667 86757060 ~ 86757361 (-)
G97283 slc1a4 non-coding downstream 42263 86753745 ~ 86756765 (-)
G97315 NA non-coding upstream 2164 86806839 ~ 86807162 (-)
G97377 NA non-coding upstream 108881 86913556 ~ 87104621 (-)
G97379 NA non-coding upstream 109149 86913824 ~ 86914345 (-)
G97401 NA non-coding upstream 165148 86969823 ~ 86997815 (-)
G97440 NA non-coding upstream 234315 87038990 ~ 87039452 (-)
G97308 NA other downstream 10976 86787057 ~ 86788052 (-)
G97251 NA other downstream 175717 86566477 ~ 86623311 (-)
G97176 NA other downstream 405939 86392561 ~ 86393089 (-)
G97047 LOC106577388 other downstream 647689 86146009 ~ 86153321 (-)
G96002 NA other downstream 1447262 85346858 ~ 85351766 (-)
G97535 NA other upstream 489682 87294357 ~ 87294999 (-)
LOC110531505 LOC106597820 other upstream 1108627 87911053 ~ 87919678 (-)
pex13 LOC106592834 other upstream 1258787 88054545 ~ 88065123 (-)
G98510 NA other upstream 1414154 88218829 ~ 88220804 (-)
G98549 NA other upstream 1509601 88314276 ~ 88314696 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G141436 NA non-coding NC_056718.1 CM032087.1 23771095 ~ 23771426 (+)