Gene
RNA
| Item | Value |
|---|---|
| gene id | G96808 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 86897011 ~ 86897593 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: repetitive proline-rich cell wall protein 2-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU106936 | True | 553 | lncRNA | 0.36 | 2 | 86897011 | 86897593 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516875 | LOC106577366 | coding | upstream | 113294 | 86764287 ~ 86783717 (+) |
| LOC110531632 | slc1a4 | coding | upstream | 140234 | 86736884 ~ 86756777 (+) |
| LOC118966035 | LOC106592896 | coding | upstream | 301440 | 86562981 ~ 86595571 (+) |
| LOC118966726 | NA | coding | upstream | 337748 | 86557726 ~ 86559263 (+) |
| LOC118966725 | NA | coding | upstream | 343356 | 86537425 ~ 86553655 (+) |
| LOC100135993 | LOC100135993 | coding | downstream | 473190 | 87370783 ~ 87373089 (+) |
| LOC118966047 | adgrb3 | coding | downstream | 578911 | 87476504 ~ 87645037 (+) |
| LOC118966730 | NA | coding | downstream | 751336 | 87648929 ~ 87661492 (+) |
| LOC118966052 | LOC106577294 | coding | downstream | 1023375 | 87920968 ~ 87928366 (+) |
| LOC110517253 | xpo1b | coding | downstream | 1056272 | 87953865 ~ 88022972 (+) |
| G96777 | NA | non-coding | upstream | 51577 | 86844815 ~ 86845434 (+) |
| G96772 | NA | non-coding | upstream | 59378 | 86837331 ~ 86837633 (+) |
| G96762 | NA | non-coding | upstream | 71725 | 86825076 ~ 86825286 (+) |
| G96761 | NA | non-coding | upstream | 72104 | 86824588 ~ 86824907 (+) |
| G96740 | NA | non-coding | upstream | 106882 | 86789904 ~ 86790129 (+) |
| G96820 | NA | non-coding | downstream | 15626 | 86913219 ~ 87103266 (+) |
| G96838 | NA | non-coding | downstream | 46319 | 86943912 ~ 86944249 (+) |
| G96849 | NA | non-coding | downstream | 76116 | 86973709 ~ 86974416 (+) |
| G96864 | NA | non-coding | downstream | 95796 | 86993389 ~ 86993706 (+) |
| G96867 | NA | non-coding | downstream | 100371 | 86997964 ~ 86998332 (+) |
| LOC118966033 | LOC106562881 | other | upstream | 401319 | 86492069 ~ 86495729 (+) |
| G96630 | LOC106592896 | other | upstream | 436169 | 86460228 ~ 86572480 (+) |
| LOC118966024 | LOC106562881 | other | upstream | 457539 | 86420114 ~ 86443279 (+) |
| G96577 | NA | other | upstream | 483799 | 86411207 ~ 86413212 (+) |
| G96133 | NA | other | upstream | 1258956 | 85637747 ~ 85638055 (+) |
| G97752 | NA | other | downstream | 859448 | 87757041 ~ 87757546 (+) |
| G98104 | NA | other | downstream | 1233445 | 88130944 ~ 88165405 (+) |
| LOC118966060 | LOC106613898 | other | downstream | 1739457 | 88608182 ~ 88744413 (+) |
| LOC118966061 | NA | other | downstream | 1743420 | 88551971 ~ 88647803 (+) |
