G97376


Basic Information

Item Value
gene id G97376
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 87100079 ~ 87364942 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU107675
TAGCAAAGCAAACATTTCAAGAAAGTACACCTGTTGCTCTACACAGACACTGTAAACAATAAGCAAAAGCCACCAAGACATGACAATGGTTGACAACAGCACCCGAACTGGATCAATCCATTTTGACCATCTAGATAAGGGGCGTCAAACTCATTTTGCTCACGGGCCGCATTCGGTCCTTAACGAGGTCTAGAAGGCCGAActgaaaatgtgttatatttccTCGCTGTTAAAATGATCAAAATGATGTCCTCTATCCATCGGGTTGGGAATGTTCTATGCACCCTGACTATCCAGCTATCAGGGAATCAAAATCAAGTCaattgttatttgtcacatgcttggtaaacaacatgTGTAGGCTAACAGGGAAATACTTACTTAGAggtccttcccaacaatacagagacAAAATAcgaaaaataatagaaaaataataacacaaggaataaatccacgatgagtaacaataacttgtcTATTTACAGtactgagtaacaataacttgtctatttacagtactgagtaatgataacttggttatatacaaggggtaccagtactgagtaatgataacttggttatatacaaggggtaacagtactgagtaatgataacttggttatatacaaggGCTACCAGTACTgggtaatgataacttggttatatacaaggGCTACCAGTACTgggtaatgataacttggttatatacaaggGCTACCAGTACTgggtaatgataacttggttatatacaagggctaccagtactgagtaatgataacttggttatatacaaggggtaccagtactgagtcatgataacttggttatatacaaggggtaccagtactgagtcatgataacttggttatatacaaggggtaccagtactaagTAATGATAACGTGTCTATATagaaggggtaccagtactgagtaatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107675 True 942 lncRNA 0.45 4 87100079 87364942

Neighbor

gene id symbol gene type direction distance location
LOC110532959 LOC106577289 coding downstream 50989 86957898 ~ 87049090 (-)
LOC118966043 NA coding downstream 145518 86926439 ~ 86954561 (-)
LOC110518258 LOC105008825 coding downstream 235959 86783824 ~ 86864120 (-)
LOC118966041 NA coding downstream 367542 86730919 ~ 86732537 (-)
LOC118936335 LOC106592896 coding downstream 401854 86663515 ~ 86698225 (-)
LOC118966049 ehbp1 coding upstream 299725 87664667 ~ 87746089 (-)
LOC110508309 LOC106600605 coding upstream 408870 87773812 ~ 87825477 (-)
LOC110531505 LOC106597820 coding upstream 546111 87911053 ~ 87919678 (-)
LOC110531618 LOC106577176 coding upstream 664586 88029528 ~ 88053890 (-)
pex13 LOC106592834 coding upstream 689603 88054545 ~ 88065123 (-)
G97461 NA non-coding downstream 13958 87085636 ~ 87086121 (-)
G97440 NA non-coding downstream 60627 87038990 ~ 87039452 (-)
G97401 NA non-coding downstream 102264 86969823 ~ 86997815 (-)
G97379 NA non-coding downstream 185734 86913824 ~ 86914345 (-)
G97315 NA non-coding downstream 292917 86806839 ~ 86807162 (-)
G97812 NA non-coding upstream 41496 87406438 ~ 87407619 (-)
G97830 NA non-coding upstream 75997 87440939 ~ 87441633 (-)
G97848 NA non-coding upstream 108106 87473048 ~ 87473627 (-)
G97857 NA non-coding upstream 121958 87486900 ~ 87488031 (-)
G97872 NA non-coding upstream 146177 87511119 ~ 87511638 (-)
G97308 NA other downstream 312027 86787057 ~ 86788052 (-)
G97251 NA other downstream 476768 86566477 ~ 86623311 (-)
G97176 NA other downstream 706990 86392561 ~ 86393089 (-)
G97047 LOC106577388 other downstream 948740 86146009 ~ 86153321 (-)
G96002 NA other downstream 1748313 85346858 ~ 85351766 (-)
G98510 NA other upstream 853887 88218829 ~ 88220804 (-)
G98549 NA other upstream 949334 88314276 ~ 88314696 (-)
G98616 NA other upstream 1187032 88551974 ~ 88644067 (-)

Expression


Co-expression Network