G97713


Basic Information

Item Value
gene id G97713
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 87656556 ~ 87657434 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU108094
TCCCTAAGGACAGACACACTGCCCTGTCCTGAGCAATCACTCTCCAGTGGTCACTAAGCAGTGTCCTTTTAAAGGGTAGTCTCTAGCTCTCCAGTGGTCACTAGACAGTGTGCTTCTAAAGGGCAGTGTCTATCTACTagccatgtcctgctctgtcagGGTGTCTGTCTCCAAGGTTCACTGTCGGATAATGATCAATCAATACATGTACTGACAGATGTCTAATTTTGAACAATGCCCTGACCTGTGCAATCACTTTTAGTAGGCATTAGACAATGCCCCCTTTTAAACGGTACTAGTACCTACTAGCAAGTAgccatgtcctggtctgtccctttttaaaggttaccagtatctagtaaccatgtcctggtctgtcccctTTTAAAGGTTACCAGTATCTAGTAGCTAGTAaccatgtcctggtctgtccccttttaaaggttaccagtatctagtaaccatgtcctggtctgtcccctTTTAAAGGTTACCAGTATCTAGTAGCTAGTAaccatgtcctggtctgtccccttttaaagGTTACCAGTATCTAGTAgccatgtcctggtctgtcccctTTTAAAGGTTACCAGTATCTAGTAACCGTCCTGATCTGTCCCCTTTTAAAGGTTACCAGTAT
>TU108096
TCCCTAAGGACAGACACACTGCCCTGTCCTGAGCAATCACTCTCCAGTGGTCACTAAGCAGTGTCCTTTTAAAGGGTAGTCTCTAGCTCTCCAGTGGTCACTAGACAGTGTGCTTCTAAAGGGCAGTGTCTATCTACTagccatgtcctgctctgtcagGGTGTCTGTCTCCAAGGTTCACTGTCGGATAATGATCAATCAATACATGTACTGACAGATGTCTAATTTTGAACAATGCCCTGACCTGTGCAATCACTTTTAGTAGGCATTAGACAATGCCCCCTTTTAAACGGTACTAGTACCTACTAGCAAGTAgccatgtcctggtctgtccctttttaaaggttaccagtatctagtaaccatgtcctggtctgtcccctTTTAAAGGTTACCAGTATCTAGTAGCTAGTAaccatgtcctggtctgtccccttttaaaggttaccagtatctagtaaccatgtcctggtctgtcccctTTTAAAGgttaccagtatctagtaaccatgtcctggtctgtcccctTTTAAAGGTTACCAGTATCTAGTAgccatgtcctggtctgtccctttttaaaggttaccagtatctagtaaccatgtcctggtctgtcccctTTTAAAGGTTACCAGTATCTAGTAGCTAGTAaccatgtcctggtc

Function

NR:

description
PREDICTED: highly divergent homeobox-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108094 False 643 lncRNA 0.44 2 87656556 87657434
TU108096 True 665 lncRNA 0.45 2 87656556 87657273

Neighbor

gene id symbol gene type direction distance location
LOC118966047 adgrb3 coding upstream 11519 87476504 ~ 87645037 (+)
LOC100135993 LOC100135993 coding upstream 283467 87370783 ~ 87373089 (+)
LOC110516875 LOC106577366 coding upstream 872839 86764287 ~ 86783717 (+)
LOC110531632 slc1a4 coding upstream 899779 86736884 ~ 86756777 (+)
LOC118966035 LOC106592896 coding upstream 1060985 86562981 ~ 86595571 (+)
LOC118966052 LOC106577294 coding downstream 263534 87920968 ~ 87928366 (+)
LOC110517253 xpo1b coding downstream 296431 87953865 ~ 88022972 (+)
LOC110531497 LOC106613810 coding downstream 547572 88205006 ~ 88226731 (+)
LOC118966060 LOC106613898 coding downstream 950748 88608182 ~ 88744413 (+)
LOC118966061 NA coding downstream 987154 88551971 ~ 88647803 (+)
G97685 NA non-coding upstream 68038 87587850 ~ 87588518 (+)
G97681 NA non-coding upstream 78712 87577330 ~ 87577844 (+)
G97664 NA non-coding upstream 110613 87545647 ~ 87545943 (+)
G97585 NA non-coding upstream 122564 87414387 ~ 87533992 (+)
G97588 NA non-coding upstream 207720 87417682 ~ 87448836 (+)
G97719 NA non-coding downstream 21554 87678988 ~ 87679262 (+)
G97723 NA non-coding downstream 36543 87693977 ~ 87701058 (+)
G97729 NA non-coding downstream 51402 87708836 ~ 87709164 (+)
G97732 NA non-coding downstream 66355 87723789 ~ 87724196 (+)
G97745 NA non-coding downstream 86980 87744414 ~ 87744944 (+)
LOC118966033 LOC106562881 other upstream 1160864 86492069 ~ 86495729 (+)
G96630 LOC106592896 other upstream 1195714 86460228 ~ 86572480 (+)
LOC118966024 LOC106562881 other upstream 1217084 86420114 ~ 86443279 (+)
G96577 NA other upstream 1243344 86411207 ~ 86413212 (+)
G96133 NA other upstream 2018501 85637747 ~ 85638055 (+)
G97752 NA other downstream 99607 87757041 ~ 87757546 (+)
G98104 NA other downstream 473604 88130944 ~ 88165405 (+)

Expression


Co-expression Network