G97759 (LOC106600605)


Basic Information

Item Value
gene id G97759
gene name LOC106600605
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 87780672 ~ 87785002 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU108160
ggggggggggttcgataTGAAAATGATAGTTGTCTTTGTGAAAATATGCTATAAACAGCCATTTCAGCTTGACGGTATCTTTGTTAATGAAGATGTCAGGCTCACAAGGAGGCCCTGAAGCAACGCTGAACAGAGCTGTTCCACAAACGTTTCTTCTGCTTCCCTTCGATATTTAAGTTACAACTGTGCACCAATACTGTATTTTAACaggccctttaatatagaccacataaTCTGACTTTTAATATGAAAAGACTTGCTACAGTGACATAAAGTCAGTATTTTGGCTAGATTTGAACCCACTTAAAGCTGCAatcagcagtaaaaaaaaaaaactataaatgAACTCCCCgcccctgttttggtaaaaagctgagggactGGGCTGAAGAACCAGACAGGGCTATGGATGGAAGGACTGATGTGGTGACAGTTGAGCTCATGAGGTATTTATCAgttacattcttcaagaatcCAAACTGGATGTAGCAACTGTTGACGGACACTTCAACCCCAGAGGTTTTCACCAACATTGTAAAGACCTGGTTATTTTCTAGAGATTAATTCATTTAATGTGGTTAGTGAATTAttttaaaggtaaaaaaaacaacaacaacctgtcccTGATTTTAAGGTGAACcctgttacatgaactgaacCCTCGTTTAAATAAGGTGAAACTATTCCTtcttaaatgttattttttttccaAAAGCAACATTGAACATCGAACAGTCAAATCAGTgtaaagcaggtgagctggttctgctctttttgtgcattttctgatgttttgtggtggaaaCCTGAGGCGGGTTGAGCAGAACACGATACATGTTAcccagaaatatatatatttaaaaaaagaagcTTGCCTTCgattgcccctccctgttgcacacaacaagcttccattacccccccccccccccccggcacaaagagatttatggctgatttaacaTGAActcttcaaccctgttacagtcaaccctgttacagtcaaccctgttacagtactTGGCACTTACTAGAGTCACTGTTTTACAGCATTTTGAAAGCTCTTTgtgcagtcagacacacagtgatAAAGAGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTgtgcagtcagacacacagtgatAAAGAGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTgtgcagtcagacacacagtgttAAAGCGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTgtgcagtcagacacacagtgatAAAGCGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTgtgcagtcagacacacagtgttAAAGAGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTGTGCAGCCAGACACACAGTGATAAAGCGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGTTTTTAAAGTTGAACATGTGATCTTTTTTTATTAGATTTATTTTCCCAAGTTACATTCTCCATCAGGGACTCTTTATCTAGCACGGCCCAGACCAGCTGAGCACTCATCcattagcctggttccagatcagtCTTGTGCCAACTCTTACGGTCATTTTCAGaccaaaacagatctgggatcagactCCTCTGTCTCCAACTCCTCATAATACAACATGGTACAGACTCTTTGTGACGTCAGACACACAGCGGGGAAACATGAAAGATCCATCAGACTTGACCATCATAACGCCATGACGACCATTTAGAAAGCTCAGAGACACGGTGACCATCATAACGCCATGACGACCATTTAGAAAGCTCAGAGACATGTTGACCATCATAACGCCATGACGACCATTTTGAAAGCTCAGACACGTTGACCATCATAACGCCATGACGACCATTTAGAAAGCTCAGAGACACGTTGACCATCATAACGCCATGACGACCATTTAGAAAGCTCAGACATGTTGACCATCATAACGCCATGACGACCATTTAGACAGCTCAGAGACACGTTGACCATCATAACGCCATGACAACCATTTAGAAAGCTCAGACACGTTGACCATCATAACGCCATGACGACCATTTAGAAGGCTCAGACACGTTGACCATCATAACGCCATGACGACCATTTAGACAGCTCAGAGATACGTTGACCATCATAACGCCATGACGACCATTTACAAAGCTCAGAGACATGTTGACCATCATAACGCCATGACGACCATTTAGACAGCTCAGAGACACGGTGACCATCATAACACCATGACGACCATTTAGAAAGCTCAGACACGTTGACCATCATAACGCCATGACGACCATTTAGAAAGCTCAGACATGTTGACCATCATAACGCCATGACGACCATTTAGACAGCTCAGAGACACGTTGGTCTGCCATCGTACCGCCATCACAGTCACGCCCTCTTTATCTTGGGATTCAAAACCTGACATGTTCATCCAAGATTCAACTTTGAAGACGGTTAACTAGCATCAACAAACATGATAATAACAACATTAAAGCTGCCAATGTTCGACTGATCCTCCAAGAGTAATAATCCttccctaaaaaaaaaaatttaaaaaaagtctCAAAATTGTGTCTGACCTTTAGAATGTAACAACCCTACCAAGTGTCACAAAACAGTGGCCACTGACCTCTCACAGAGTTACTATAACAACCAGCATAACAAAATGGCCGCCTGTCGTGGTGTCTGGTCCAGGCAGTTACCGACAGTTTAAGTCACCTGTCTTCCCTGGTTACTGACAGCTCAAATAAAAAATGGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATGGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATAGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATGGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATAGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATAGCCACCGACACCCGTTGTCCCCAGTTTCTGAAGTCAAAATGGAGACGGGCTGGGAAGTTACTGACAGGTCAAGTTGGGGTCATTGAGCCAGGCCCAGATCTGGATCATCTCCTGCGGTGTCCGGCTGTGTACCAGCATCAGACCCTTATAGGCACACGGGTTCCTCCTGTACTTCTCCTCAATGTCAAACGTCTTGAAGCCTTTGTGTTTCTCCGGCCCCAGCCCCAGCTTCCTCAGACACATCCCTGTGTAAACGTCGTCGATGGGGTAGAGAGGTACGTGCTGCGAGGCTCCGTGCAGCCGTCTGGCCAGGTCCCCGGAGTACAGATACCCCCCTCCGCCCGCGTATGGCGGGTACTTGCCAACGAACAAACTCTCTGGGATGAAGTACTTGACCTTTTTATCCCTGTTCGGCCCCGCGTTGGTGATCACATCCCCTACAAACAGGTCCCTTGCCCGGGGCCCCGAGAGGCCCTTGAGGAAGGCCAGGATCCTCAACGTATTGACAAAGACGTCATCGTCCCCTTTAAAGACGAACTGAGCTCCAGGGCAGCGTGTGGTCATCCAGTCCAGGAAGAGCACCTCCTTGACGGTCAGGTTGAAGAACGAGTCCCGGT
>TU108161
ggggggggggttcgataTGAAAATGATAGTTGTCTTTGTGAAAATATGCTATAAACAGCCATTTCAGCTTGACGGTATCTTTGTTAATGAAGATGTCAGGCTCACAAGGAGGCCCTGAAGCAACGCTGAACAGAGCTGTTCCACAAACGTTTCTTCTGCTTCCCTTCGATATTTAAGTTACAACTGTGCACCAATACTGTATTTTAACaggccctttaatatagaccacataaTCTGACTTTTAATATGAAAAGACTTGCTACAGTGACATAAAGTCAGTATTTTGGCTAGATTTGAACCCACTTAAAGCTGCAatcagcagtaaaaaaaaaaaactataaatgAACTCCCCgcccctgttttggtaaaaagctgagggactGGGCTGAAGAACCAGACAGGGCTATGGATGGAAGGACTGATGTGGTGACAGTTGAGCTCATGAGGTATTTATCAgttacattcttcaagaatcCAAACTGGATGTAGCAACTGTTGACGGACACTTCAACCCCAGAGGTTTTCACCAACATTGTAAAGACCTGGTTATTTTCTAGAGATTAATTCATTTAATGTGGTTAGTGAATTAttttaaaggtaaaaaaaacaacaacaacctgtcccTGATTTTAAGGTGAACcctgttacatgaactgaacCCTCGTTTAAATAAGGTGAAACTATTCCTtcttaaatgttattttttttccaAAAGCAACATTGAACATCGAACAGTCAAATCAGTgtaaagcaggtgagctggttctgctctttttgtgcattttctgatgttttgtggtggaaaCCTGAGGCGGGTTGAGCAGAACACGATACATGTTAcccagaaatatatatatttaaaaaaagaagcTTGCCTTCgattgcccctccctgttgcacacaacaagcttccattacccccccccccccccccggcacaaagagatttatggctgatttaacaTGAActcttcaaccctgttacagtcaaccctgttacagtcaaccctgttacagtactTGGCACTTACTAGAGTCACTGTTTTACAGCATTTTGAAAGCTCTTTgtgcagtcagacacacagtgatAAAGAGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTgtgcagtcagacacacagtgatAAAGAGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTgtgcagtcagacacacagtgttAAAGCGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTgtgcagtcagacacacagtgatAAAGCGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTgtgcagtcagacacacagtgttAAAGAGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGTTTTTAAAGTTGAACATGTGATCTTTTTTTATTAGATTTATTTTCCCAAGTTACATTCTCCATCAGGGACTCTTTATCTAGCACGGCCCAGACCAGCTGAGCACTCATCcattagcctggttccagatcagtCTTGTGCCAACTCTTACGGTCATTTTCAGaccaaaacagatctgggatcagactCCTCTGTCTCCAACTCCTCATAATACAACATGGTACAGACTCTTTGTGACGTCAGACACACAGCGGGGAAACATGAAAGATCCATCAGACTTGACCATCATAACGCCATGACGACCATTTAGAAAGCTCAGAGACACGGTGACCATCATAACGCCATGACGACCATTTAGAAAGCTCAGAGACACGGTGACCATCATAACACCATGACGACCATTTAGAAAGCTCAGACACGTTGACCATCATAACGCCATGACGACCATTTAGAAAGCTCAGACATGTTGACCATCATAACGCCATGACGACCATTTAGACAGCTCAGAGACACGTTGGTCTGCCATCGTACCGCCATCACAGTCACGCCCTCTTTATCTTGGGATTCAAAACCTGACATGTTCATCCAAGATTCAACTTTGAAGACGGTTAACTAGCATCAACAAACATGATAATAACAACATTAAAGCTGCCAATGTTCGACTGATCCTCCAAGAGTAATAATCCttccctaaaaaaaaaaatttaaaaaaagtctCAAAATTGTGTCTGACCTTTAGAATGTAACAACCCTACCAAGTGTCACAAAACAGTGGCCACTGACCTCTCACAGAGTTACTATAACAACCAGCATAACAAAATGGCCGCCTGTCGTGGTGTCTGGTCCAGGCAGTTACCGACAGTTTAAGTCACCTGTCTTCCCTGGTTACTGACAGCTCAAATAAAAAATGGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATGGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATAGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATGGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATAGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATAGCCACCGACACCCGTTGTCCCCAGTTTCTGAAGTCAAAATGGAGACGGGCTGGGAAGTTACTGACAGGTCAAGTTGGGGTCATTGAGCCAGGCCCAGATCTGGATCATCTCCTGCGGTGTCCGGCTGTGTACCAGCATCAGACCCTTATAGGCACACGGGTTCCTCCTGTACTTCTCCTCAATGTCAAACGTCTTGAAGCCTTTGTGTTTCTCCGGCCCCAGCCCCAGCTTCCTCAGACACATCCCTGTGTAAACGTCGTCGATGGGGTAGAGAGGTACGTGCTGCGAGGCTCCGTGCAGCCGTCTGGCCAGGTCCCCGGAGTACAGATACCCCCCTCCGCCCGCGTATGGCGGGTACTTGCCAACGAACAAACTCTCTGGGATGAAGTACTTGACCTTTTTATCCCTGTTCGGCCCCGCGTTGGTGATCACATCCCCTACAAACAGGTCCCTTGCCCGGGGCCCCGAGAGGCCCTTGAGGAAGGCCAGGATCCTCAACGTATTGACAAAGACGTCATCGTCCCCTTTAAAGACGAACTGAGCTCCAGGGCAGCGTGTGGTCATCCAGTCCAGGAAGAGCACCTCCTTGACGGTCAGGTTGAAGAACGAGTCCCGGT
>TU108162
ggggggggggttcgataTGAAAATGATAGTTGTCTTTGTGAAAATATGCTATAAACAGCCATTTCAGCTTGACGGTATCTTTGTTAATGAAGATGTCAGGCTCACAAGGAGGCCCTGAAGCAACGCTGAACAGAGCTGTTCCACAAACGTTTCTTCTGCTTCCCTTCGATATTTAAGTTACAACTGTGCACCAATACTGTATTTTAACaggccctttaatatagaccacataaTCTGACTTTTAATATGAAAAGACTTGCTACAGTGACATAAAGTCAGTATTTTGGCTAGATTTGAACCCACTTAAAGCTGCAatcagcagtaaaaaaaaaaaactataaatgAACTCCCCgcccctgttttggtaaaaagctgagggactGGGCTGAAGAACCAGACAGGGCTATGGATGGAAGGACTGATGTGGTGACAGTTGAGCTCATGAGGTATTTATCAgttacattcttcaagaatcCAAACTGGATGTAGCAACTGTTGACGGACACTTCAACCCCAGAGGTTTTCACCAACATTGTAAAGACCTGGTTATTTTCTAGAGATTAATTCATTTAATGTGGTTAGTGAATTAttttaaaggtaaaaaaaacaacaacaacctgtcccTGATTTTAAGGTGAACcctgttacatgaactgaacCCTCGTTTAAATAAGGTGAAACTATTCCTtcttaaatgttattttttttccaAAAGCAACATTGAACATCGAACAGTCAAATCAGTgtaaagcaggtgagctggttctgctctttttgtgcattttctgatgttttgtggtggaaaCCTGAGGCGGGTTGAGCAGAACACGATACATGTTAcccagaaatatatatatttaaaaaaagaagcTTGCCTTCgattgcccctccctgttgcacacaacaagcttccattacccccccccccccccccggcacaaagagatttatggctgatttaacaTGAActcttcaaccctgttacagtcaaccctgttacagtcaaccctgttacagtactTGGCACTTACTAGAGTCACTGTTTTACAGCATTTTGAAAGCTCTTTgtgcagtcagacacacagtgatAAAGAGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTgtgcagtcagacacacagtgatAAAGAGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTgtgcagtcagacacacagtgttAAAGCGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTgtgcagtcagacacacagtgatAAAGCGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTGTGCAGCCAGACACACAGTGTTAAAGAGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTGTCTGAAAGCTCTTTgtgcagtcagacacacagtgttAAAGAGTTATCATTAAGGTCCATCAGTCAGATCTCTTCAGACTGGGAAACGTCTGTTTTTAAAGTTGAACATGTGATCTTTTTTTATTAGATTTATTTTCCCAAGTTACATTCTCCATCAGGGACTCTTTATCTAGCACGGCCCAGACCAGCTGAGCACTCATCcattagcctggttccagatcagtCTTGTGCCAACTCTTACGGTCATTTTCAGaccaaaacagatctgggatcagactCCTCTGTCTCCAACTCCTCATAATACAACATGGTACAGACTCTTTGTGACGTCAGACACACAGCGGGGAAACATGAAAGATCCATCAGACTTGACCATCATAACGCCATGACGACCATTTAGAAAGCTCAGAGACACGGTGACCATCATAACGCCATGACGACCATTTAGAAAGCTCAGAGACACGTTGACCATCATAACGCCATGACGACCATTTAGAAAGCTCAGACATGTTGACCATCATAACGCCATGACGACCATTTAGACAGCTCAGAGACACGTTGGTCTGCCATCGTACCGCCATCACAGTCACGCCCTCTTTATCTTGGGATTCAAAACCTGACATGTTCATCCAAGATTCAACTTTGAAGACGGTTAACTAGCATCAACAAACATGATAATAACAACATTAAAGCTGCCAATGTTCGACTGATCCTCCAAGAGTAATAATCCttccctaaaaaaaaaaatttaaaaaaagtctCAAAATTGTGTCTGACCTTTAGAATGTAACAACCCTACCAAGTGTCACAAAACAGTGGCCACTGACCTCTCACAGAGTTACTATAACAACCAGCATAACAAAATGGCCGCCTGTCGTGGTGTCTGGTCCAGGCAGTTACCGACAGTTTAAGTCACCTGTCTTCCCTGGTTACTGACAGCTCAAATAAAAAATGGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATGGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATAGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATGGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATAGCCACCGACACCTGTTGTCCCCGGTTTCTGAAGTCAAAATAGCCACCGACACCCGTTGTCCCCAGTTTCTGAAGTCAAAATGGAGACGGGCTGGGAAGTTACTGACAGGTCAAGTTGGGGTCATTGAGCCAGGCCCAGATCTGGATCATCTCCTGCGGTGTCCGGCTGTGTACCAGCATCAGACCCTTATAGGCACACGGGTTCCTCCTGTACTTCTCCTCAATGTCAAACGTCTTGAAGCCTTTGTGTTTCTCCGGCCCCAGCCCCAGCTTCCTCAGACACATCCCTGTGTAAACGTCGTCGATGGGGTAGAGAGGTACGTGCTGCGAGGCTCCGTGCAGCCGTCTGGCCAGGTCCCCGGAGTACAGATACCCCCCTCCGCCCGCGTATGGCGGGTACTTGCCAACGAACAAACTCTCTGGGATGAAGTACTTGACCTTTTTATCCCTGTTCGGCCCCGCGTTGGTGATCACATCCCCTACAAACAGGTCCCTTGCCCGGGGCCCCGAGAGGCCCTTGAGGAAGGCCAGGATCCTCAACGTATTGACAAAGACGTCATCGTCCCCTTTAAAGACGAACTGAGCTCCAGGGCAGCGTGTGGTCATCCAGTCCAGGAAGAGCACCTCCTTGACGGTCAGGTTGAAGAACGAGTCCCGGT

Function

NR:

description
PREDICTED: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108160 False 3745 lncRNA 0.39 5 87780672 87785002
TU108161 False 3232 lncRNA 0.35 5 87780672 87785002
TU108162 True 3273 lncRNA 0.45 4 87780672 87785002

Neighbor

gene id symbol gene type direction distance location
LOC118966730 NA coding upstream 119180 87648929 ~ 87661492 (+)
LOC118966047 adgrb3 coding upstream 135635 87476504 ~ 87645037 (+)
LOC100135993 LOC100135993 coding upstream 407583 87370783 ~ 87373089 (+)
LOC110516875 LOC106577366 coding upstream 996955 86764287 ~ 86783717 (+)
LOC110531632 slc1a4 coding upstream 1023895 86736884 ~ 86756777 (+)
LOC118966052 LOC106577294 coding downstream 135966 87920968 ~ 87928366 (+)
LOC110517253 xpo1b coding downstream 168863 87953865 ~ 88022972 (+)
LOC110531497 LOC106613810 coding downstream 420004 88205006 ~ 88226731 (+)
LOC118966060 LOC106613898 coding downstream 823180 88608182 ~ 88744413 (+)
LOC118966061 NA coding downstream 859586 88551971 ~ 88647803 (+)
G97758 NA non-coding upstream 4201 87773893 ~ 87776471 (+)
G97768 NA non-coding upstream 11980 87768302 ~ 87768692 (+)
G97755 NA non-coding upstream 19967 87760501 ~ 87760705 (+)
G97754 NA non-coding upstream 21281 87759018 ~ 87759391 (+)
G97745 NA non-coding upstream 35728 87744414 ~ 87744944 (+)
G97786 NA non-coding downstream 39581 87824583 ~ 87864025 (+)
G98002 NA non-coding downstream 80141 87865143 ~ 87865440 (+)
G98014 NA non-coding downstream 88973 87873975 ~ 87874320 (+)
G98016 NA non-coding downstream 96256 87881258 ~ 87881600 (+)
G98024 NA non-coding downstream 103349 87888351 ~ 87888572 (+)
G97752 NA other upstream 23126 87757041 ~ 87757546 (+)
LOC118966033 LOC106562881 other upstream 1284980 86492069 ~ 86495729 (+)
G96630 LOC106592896 other upstream 1319830 86460228 ~ 86572480 (+)
LOC118966024 LOC106562881 other upstream 1341200 86420114 ~ 86443279 (+)
G96577 NA other upstream 1367460 86411207 ~ 86413212 (+)
G98104 NA other downstream 346036 88130944 ~ 88165405 (+)
LOC118966062 NA other downstream 861454 88646294 ~ 88649794 (+)

Expression


Co-expression Network