XLOC_020405 (cpamd8)


Basic Information

Item Value
gene id XLOC_020405
gene name cpamd8
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 21252790 ~ 21304247 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040491
ATGAGCAACTTCATCCTTCATACCAGGGCTGGCCAGAGCCTAGTGCCAGTGTCTGTACCTGTTACATGTGATTGTGCCAAGTATTTAGAGTACCAGAGAAAGAGGTCAACAGCCAACTTAGCCTTTCCAACAAAGAGCTACATTCTCTTGAGTCAGCTAGTGGCTCTTCTTTCCTTTAACAAGACAGTGCGATCATttgCTCTGTGCTCCCGTCCTTTGATTCACAGGGGTTACCTGATTGCTGCACCATCTGTGTTTCGTGCTGGCGTGGAAGAAGCCGTGAGCGTCACCCTCTTCAATATGGTGGAGGACACACGAGTACAACTACAGCTCAGCGTCAAGGGCGAGATTGTGGCACACAGCCATGGCACAGTAAGAGATAAGGGCACCATTAAAATAAAGGTGCCATCAGATCTAAGAGGCCAGGCACATCTGAAAGTTTGGGGGAACTGCCAGCTCAACGAGGGCGGCTACATCTTCCAAAACCACACCACTGTGACGATAGACAGCAAAGGCACAACAGTTTTCATTCAGACTGACAAACCAGTCTATAAGCCCCAACAAAAAGatttaagcaaaacaaataagCAAGAATGTGACTATTTGTACCACAAACTGTTTAAGATTACCACGTTGTTTACCCAGGACCCCAGAGGATCCCACATAGTCCATTGGAAAGATCTGAAGTCAATTTGTTGTGGAATTGTCAATATGAGCTTTCCACTATCAGACCAACCAGTTTTTGGTGAATGGTTAGTCTTTGTCGAGATGCAAGGCCACACGTACAACAAATCGTTTGAAGTGCAGAAGTACGTTATGCCCAGGTTTGAGCTCATCATTGTACCACCTCCATATATTCGAGATCTCAATTCTTGTGAACAGGTCACAGTCAAAGCAAGGTACACCTTTGGAAAACCAGTGTCAGGCAAATTAACGGTTAATATGACTGTTAATGGAGTAGGCTACTACAGACATGAAGTAGGCCACCCAGTGATCAAAGGCTCCGCTTCTTTCAGCCTCTGTGTGAAGGACATGATGCCAATAGAAGTTACAGATCATTTCCGAGGTGCAGTGAACATGTGGGTCACAGTAAACAGTGTGGATGGGGGGCAACAGACCATGTTTGATGATTCAACACCTGTCCACAAGCAGCTCATTGACATCAAGTACTCCAAAGATACTCGCAAACAGTTCAAACCTGGTCTTCCCTACAAGGGCATGATTGAGGTCACCTATCCAGATGGGAGCCCAGCGGAAGGAGTGCATGTGCGGGTTAAGGCAGAACTTACTCCAAAAGACAACGTGTACACCAGCGAACTGGTCTCAAAAAATGGGAAGGCCACTTTCGAGATTCCCTCCATTCCCACGGCTGCCCAGTACGTCTGGCTGGAGGTGTTCAAGGATCTGGCCGAGTTTGATGTATCTGATGCCTTTGGGGTACCCAAAGATGAGGGACATTTTTGGTGGCCCGGATTGTCTTCACGAAGGCGACGTTCCTCCGTGTTTCCATGGCACTGGGACATCACTAAAGATGCCCGTTTTGCTTTTACGGTGAGGACATGA
>TCONS_00040492
AGGTGCCATCAGATCTAAGAGGCCAGGCACATCTGAAAGTTTGGGGGAACTGCCAGCTCAACGAGGGCGGCTACATCTTCCAAAACCACACCACTGTGACGATAGACAGCAAAGGCACAACAGTTTTCATTCAGACTGACAAACCAGTCTATAAGCCCCAACAAAAAGTACTTATAAATGTGTATGCTGTCACGCCAGACCTAAAGCCCACCAGTGAAAAGctTGAAGCATACATTGTGGACCCCAGAGGATCCCACATAGTCCATTGGAAAGATCTGAAGTCAATTTGTTGTGGAATTGTCAATATGAGCTTTCCACTATCAGACCAACCAGTTTTTGGTGAATGGTTAGTCTTTGTCGAGATGCAAGGCCACACGTACAACAAATCGTTTGAAGTGCAGAAGTACGTTATGCCCAGGTTTGAGCTCATCATTGTACCACCTCCATATATTCGAGATCTCAATTCTTGTGAACAGGTCACAGTCAAAGCAAGGTACACCTTTGGAAAACCAGTGTCAGGCAAATTAACGGTTAATATGACTGTTAATGGAGTAGGCTACTACAGACATGAAGTAGGCCACCCAGTGGTGAAATCAATGGAGATCAAAGGCTCCGCTTCTTTCAGCCTCTGTGTGAAGGACATGATGCCAATAGAAGTTACAGATCATTTCCGAGGTGCAGTGAACATGTGGGTCACAGTAAACAGTGTGGATGGGGGGCAACAGACCATGTTTGATGATTCAACACCTGTCCACAAGCAGCTCATTGACATCAAGTACTCCAAAGATACTCGCAAACAGTTCAAACCTGGTCTTCCCTACAAGGGCATGATTGAGGTCACCTATCCAGATGGGAGCCCAGCGGAAGGAGTGCATGTGCGGGTTAAGGCAGAACTTACTCCAAAAGACAACGTGTACACCAGCGAACTGGTCTCAAAAAATGGGAAGGCCACTTTCGAGATTCCCTCCATTCCCACGGCTGCCCAGTACGTCTGGCTGGAGTCAAAAGTGACTGCCATTGATGGCAAGCCTGCAGGAGACCAGTATCTCCCCAACTACCTGTCCATCACTAGCTGGTATTCTCCCAGCAAATGCCACATCCAGCTCCTAAGTCCCAGTGCTCCTCTAATGATTGGGCAAGAAGCAGAAATCTTCCTGAAGTCCACCTGTCCTTGTAACTTCACCTTGCACTATGAGATTGCTTCCCGTGGGAATATCGTGCAGTCAGGTCAGAGGCATGCGAACAGCACAACTCATCGCGAAAAGAGAGCTACCATAACCTTTGACACGAACATTCACACAACTGCCAAACCCCAACAAGACTCAGACTCTTCTCAGGCTGAAATGGACAGCTGCGTTTCAGTTCTGCATTTCAATGTGACTCCCCCCATGGCCCCTCTCAGTCGCCTACTAGTCTACTATGTTCGGGAAAATGGAGAGGGAGTGACTGACAGTCTGCAACTTCCAGTGCAGTCCCGCTTCGAAAATGAGATCTCTGTGTCTTTGTCCACAAATGAGTCGATGCCAGGAAGCCCGATCAGTCTGAAGGTTAAAGCAGAAAGTGGCTCATGTGTATGTGTAGCTTCTGTGGACAAAAGCATGTACCTTCTCAAACCAGGCTTCCAGCTCACACCTGAAAAGGTGTTCAAGGATCTGGCCGAGTTTGATGTATCTGATGCCTTTGGGGTACCCAAAGATGAGGGACATTTTTGGTGGCCCGGATTGTCTTCACGAAGGCGACGTTCCTCCGTGTTTCCATGGCACTGGGACATCACTAAAGATGCCCGTTTTGCTTTTACGGAGACAGGGCTGGTGGTGATGACAGACATGGTGAGTCTCAATCACAGACAGAGTGGAGGGATGTACACAGACGAGGCCGTACCTGCGTTTCAACCACACACCTCTACCCTGGTGGCAGCTATGCACTCCCGATCTGGGACACGGGCAGAGAACCGTAGGCGTACATTCTTTCCAGAAACATGGATATGGCATTGCTTTAATGTCAGCAGTCTTAATGGAGAAGCTGAATTACACTTGGACATCCCAGATTCCATCACCACATGGGTGACAGAGGCTATTGGTTTGTCTGCAGAAAAGGGTTTGGGCTTGGCTCGGACTGCAGAACTGCGTACATTTAAGCCCTTCTTCATCGACTTCACTCTGCCATACAGCATTGTTCGTGGTGAACAAACTAAAGTCCCGCTCACAGTATACAACTACTTGCCTACATGTTCAGAGGTCCATGTGAAAGTGTCAGTGCCCAAAGGGATCAAGTTTGTGGGTCACCCAGGGAAGCACCATCTTACCCGGAAAAAGTGTGTGGCACCTGGGGAGGCCACGCCCACTTTTATAGTTCTGCTGTTTTCTGAACTAGTGTCTGCCAACATCACAGCTCGCGCTGTGGCCTACAGTGAGCCAAGTTGCTGCTCTGATGGGCTGCAGTCCAGCAAAGCAAGCAAAGCGGGTGAGGAACAGGAAGACAGAAGCCCTGTGGGCATGGATTATGTGCGCAGGAGTGTGCTGGTAGAGCCTGAAGGTTTGCCCAGAGAGTACACGTACAGCGTCTTTTTCTGTCCAAATGAACGAATCCACATTTCCACACCCAACAAATACGAGTATCAATATGTGAAGAAGCCAGCCAAAGTCACGCATGTCCAAGTGGCCATCAAAAGTCACAATGATGCCCATATTGCCCTCTCTCCCAGCGCACATGACAGCACTGAAATGGTGGAGATTGTGCTGGGTGGGCGGCAAAACTCGCGCTCCTGGATCTCACGGGGAAAGATGGGAGAGCCTGTAGTTAGCACCCCAACACCGGGAATCCTGTCCTGGGATGAGTTCCGCAGCTTTTGGATCAGCTGGAGAGGAGGGGGAGTGCAGGTGGGACATGGCCTAGAGCCATCCAGTGAGACCACGATTCTGCAATTGGCCGGACCACTTACTAGTCAGGTGCGTCATATCGGTTTTTCCACTGGTTGGGGTTCCATAGGTGAGTTCAGGATCTGGCGCAAAGAAGATGCTGATGAGAACCACAATGAGGCCTTCACTCTGGGAGTCCCACACAATGTGGTGCCAGGCTCAGAGAGAGCCACCGCTGCCATGATTGGTGATGTTATGGGGCCCACCCTCAATAACCTTGACAAGCTTCTAAGACTCCCCTTTGGTTGTGGGGAGCAGAACATGATCCACTTTGCTCCCAATGTCTTTGTGCTGAAGTACCTTCAGAAAACCCATCAGCTTAGCCTAGAGGTGGAGGCAGAGGCTACAGACTACCTACTTCAAGGTTATCAGAGGCAACTGACATACAAGAGGCAGGATGGTTCCTACAGTGCCTTTGGGGAAAGAGATTCCTCCGGAAGCATGTGGTTGACAGCATTCGTACTGAAATCATTTGCCCAGTCACGGGGTTTCATCTTTATTGATCCAGAGGAACTGCGTGCTGCCAAATCCTGGCTGATATCCAATCAAAAGGATGAAGGATCATTCCCAGCAATGGGCCGAATACTCAACAAAGACCTTCAGGGTGGGATTCATGGAAAGATCTCCTTGACTGCATATGTGGTGGTGGCTCTTATGGAAACTGGAATTACAACAGAGGAGGAAAATGTTGCTGTGGCTAAAGCGAAGGCATTTTTGGAGAGCAACACTTACTCTGCTGACGACCCATATACAACCGCTCTATCAGCATATGCACTCACTTTACTTCGCAGTCCTTATGCTCCACTGGCTTTACGGAGACTTAATCACATGGCCATTACCCAAGATGGTTTCACTCATTGGAGTCTTACTGGCAGGACAGAAACTGATGAGGACACGTTCATGGGATTTAGCGATGGCCTCTCCCAGTCAGTTGTGTCAGCCGAAGTTGAGATGACAGCTTATGGTCTACTCACCTACACACTTCTGGGTGATGTGGCTTCAGCTCTTCCTGTAGTTAAATGGTTGTCACAACAAAGGAACGCCCTGGGTGGTTTTTCCTCAACAcagGACACTTGTGTGGCATTGCAGGCTCTGTCCGAATATGCGATCCTGTcatatgtgggcggagtaaatCTCACTATATCTCTGGCTTCAACTAATCTGGATTTTCAAGAAACTTTTGAACTTCAGTGGGACAACAAGAAGATTCTACAAAAAGCTGTGATACCCAGCATTCCAACAGGACTGTTTGTCAGCGCTAAAGGAGAGGGCTGCTGTCTAATGCAGATTGATGTATCCTACAATGTGCCTGATCCTGTGGCCAAACCAGCTTTTCAGTTGAAAGTTGACCTTAAGGAGCCAAGGCAGGAGCAACACATCTTGCCATCCTCACGACACATATCTCCTCGCACACGTTCCCGTGCTGACAACCGCTCAGAGCTGACTCGCAAAAGAAGGGCTCCTGTGGATGACGAGGACCCTGCAGGCCACCAAGATCACCTGGACTACCGTGTTACTTTGGAGGTCTGCACCAGGTGGCTACATGTTGGTTCATCCAACATGGCTGTCCTAGAAGTCCCTCTGTTATCTGGTTTCCGTGCAGATATTGAGAGTTTGGAGAGGCTCTTGCTGGATAAGCGAGTGGGGCTGAAGAGGTACGAAGTAGATGGACGAAAGGTTCTCTTCTACTTTGATGAGATCCCCAGTCAGTGCATGACCTGTGTGGCCTTCAATGCTGTAAGAGAGTATATTGTGGGAAAGACAGCTCCAGTGCCAGTGAAAGTCTATGATTATTATGAACCAGCATTTGAAGCCACTCGTTTCTATAATGTGAGTGAGAGCAGTCCTCTAGCACGAGAACTTTGCGATGGCACCACATGTAATGAAGTGGAAAGTTCCCGCAATCATTGGACAGGCTTTGTGCAAGGCAGCCAGTGCAACAACATTTTTGACTGTCCAGAAGAGGAACACTATGAGCGATGTACCTGTTATCGTGACTGCGGCTATGATGGCGAGCCAGTGTGTGGTTCAGATGGCCAAATCTACCAGAACCAGTGTCAGATGGAAGTGTCTGCTTGCAGAAACAGCACACGGATTGAACAGATGCCTTTCAGCCACTGCCCACAGACGGGGGTAGTAGCTGTAGAAGAACGAGAGCGTGCGACAGGAGAAGAACCAGAGCAGGAACCTATACTCATTCCTGCAGGAGGAGAGGAGCCAGGCTCTGTGGCTGAGGTTTCTTACTATTCGTATGAGTACGACCCTGACACAGACGGCTTTTCACCAGATAGCGAGGAGAAATTAGTGCCTATAGGAGAAGAACAGGACACACCAGACACCACACAGCCTTTGAGCAGACATATCCTCACAGTGGACACAAAGGACTCACCTGAGCGATGAAACTCCTGGATCCCAGCAGCAAGTGCGAGAGCTCAACAATGTACATTCTCTGTGAATATGTTTGTGTGAAAGAAGCGCTGGAAGAGACAGGTGAACCCCGTCTGTTGGAACGAAATGACAGctctttttgtgtgtgcgtgtgtgttcaaAAAGAGAGGCAATATCAGTACTCCTcttgttttaaattcatttccATAGCTCTTTATGTTTAGTGATATGACGTCTCCCTGTATTCCTCTAGTTTTAACAGTCTAGTATTTATGTCTGTAAGTATGATTTACCTAAAAATCCAatattttaattgtgtttgtttactATCTGTGGTATTTATTTGTGGCTAGTGCTTTTGTCTGATTGGTTCGTTCTCATGTAATTTCCTCAAATTTGCATTGAACACAATCTAAATGTGCTATAAATTGAAATGCACTTCCAGAGCAAAACAAAAAATTGTGCTTTAAGGTGTGtagctattttttatttcttattaatgTCCGATTCGTTCACCGGAGAGGAGACTGTAACTGATATATAAGCTTCCTGTCCAGTCAGCCTGTGCTATTCAAGGCTCTGCCAGTGCTCTGCTACATTCTCAGaaataccttttcaaaaggtaaaaaTTTGAACCAACAAGGTCCATATCAATacatcaagggtacatattaattcataaaaaaatacaaaaatgttccttttaaattttaaggtactaatatatacttttgaggtaccaatatcgaccctttaagtacaaatgaacAGCTTGTACAACTTTTGAAAaggaaccaccccagtgacagcttgcgtaacttTGTTTCTGAGAATGTACACAAACTGGAATATAATTTGTACAGAATATAAGCTATTTTGACGAAAATACCATGCTAAATTGACCCTTTATTGGGCACTCATTGAAATACTACAAAATACCAAAACCATGGAAAGTTATTGAGGGTTAGAAGACTTCTATGATTTTAAAACACTAATTTTAAGTAGGAAATCAAGGTCAATGAAGTTaccatatttgattttttttatccattaaaAGGGTAAAATTGATAGCACCTAAAAAATCTGCATCAtgatcattaaattaataatacattttggttcatttcactgtgtaTCCAGGTATAAAAGAGTGAttttaatatcatttactgtATTGAAAGTTccattaaataaatgataaaaatgcatATTCTGCAAAGTATTCTGCCTATGTAAATTTTGAAAATTAATGTCAAAAGCGAAACATTTagaaaacaatgaacagaaatacattttaatgcaatCTG
>TCONS_00040493
CTGATGAGGACACGTTCATGGGATTTAGCGATGGCCTCTCCCAGTCAGTTGTGTCAGCCGAAGTTGAGATGACAGCTTATGGTCTACTCACCTACACACTTCTGGGTGATGTGGCTTCAGCTCTTCCTGTAGTTAAATGGTTGTCACAACAAAGGAACGCCCTGGGTGGTTTTTCCTCAACAcaggtaagaaaaacaaatattttgtttttcagccCTTGGTTTTCTAGATTTTTGAAGTGTGTGTAGAACGAATTTTATGCAGATGTTTTGTTTGTCTACATATAATCAACTGCATTTGCTAAAatgtgcaacatttcacaatgcaATGAATTCCTTACAGCTTGTACAATTTTTCCATTATCCATCAAACGCTTACAGTTGAACACGAATCAACTATGTTCAAGGGGtatcacgatactggaattcgataccaattggtactgtaattttaaaaacgtccatttacCACAAGCATTTAAGAGCTGaggagcacgttcttaaacagcgctgatttgccattgtgttcacatgctcaacagaaaagaccgtgattggccgtgaaggtcatcagttcactgaatcactgctgtttactgattgtaaccacagatacaaggacactggagcgtttcaaagtcaagtcaatcagctggtttgtctataggCTGACACACGAGCCACCCGCTAATGAATCGTGGCTTTAAAACGTGCTCCACAGTgcttaaatgttcatttttaaaatgtcagtaccAATTGGTATGAAAAGGCTATTGGCCAAAAGactataactgcaaaaaaaaaaaaaaa

Function

symbol description
cpamd8 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within negative regulation of peptidase activity. Predicted to be located in extracellular space. Is expressed in iris and periocular mesenchyme. Used to study anterior segment dysgenesis. Human ortholog(s) of this gene implicated in anterior segment dysgenesis 8. Orthologous to human CPAMD8 (C3 and PZP like alpha-2-macroglobulin domain containing 8).

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005615 extracellular space cellular_component
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-428 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within negative regulation of peptidase activity. Predicted to be located in extracellular space. Is expressed in iris and periocular mesenchyme. Used to study anterior segment dysgenesis. Human ortholog(s) of this gene implicated in anterior segment dysgenesis 8. Orthologous to human CPAMD8 (C3 and PZP like alpha-2-macroglobulin domain containing 8).

Ensembl:

ensembl_id ENSDARG00000056530

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040491 False 1563 mRNA 0.47 11 21252790 21264881
TCONS_00040492 False 6613 mRNA 0.46 40 21255860 21304247
TCONS_00040493 True 809 lncRNA 0.40 2 21279721 21281352

Neighbor

gene id symbol gene type direction distance location
XLOC_020404 crlf1b coding upstream 87598 21152847 ~ 21165192 (+)
XLOC_020403 NA coding upstream 111671 21134709 ~ 21141119 (+)
XLOC_020402 CU693455.2 coding upstream 158825 21093851 ~ 21093965 (+)
XLOC_020401 si:dkey-211f22.5 coding upstream 505728 20720808 ~ 20747062 (+)
XLOC_020400 peak3 coding upstream 540136 20710434 ~ 20712654 (+)
XLOC_020406 odf3l2b coding downstream 1435 21305682 ~ 21311540 (+)
XLOC_020407 shc2 coding downstream 13350 21317597 ~ 21351469 (+)
XLOC_020408 shdb coding downstream 94261 21398508 ~ 21465808 (+)
XLOC_020409 mier2 coding downstream 212442 21516689 ~ 21547857 (+)
XLOC_020410 plpp2b coding downstream 245172 21549419 ~ 21584670 (+)
XLOC_020399 NA non-coding upstream 678830 20571834 ~ 20573960 (+)
XLOC_020395 NA non-coding upstream 818773 20433570 ~ 20434017 (+)
XLOC_020393 NA non-coding upstream 919956 20312803 ~ 20332834 (+)
XLOC_020412 NA non-coding downstream 364918 21669165 ~ 21766839 (+)
XLOC_020413 NA non-coding downstream 482532 21786779 ~ 21787648 (+)
XLOC_020414 NA non-coding downstream 484849 21789096 ~ 21797741 (+)
XLOC_020415 NA non-coding downstream 518712 21822959 ~ 21823227 (+)
XLOC_020416 NA non-coding downstream 544039 21848286 ~ 21852131 (+)

Expression


Co-expression Network