Gene
RNA
| Item | Value |
|---|---|
| gene id | G98502 |
| gene name | actr2a |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 88210961 ~ 88212201 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| actr2a | Predicted to enable ATP binding activity and actin binding activity. Predicted to contribute to actin filament binding activity. Predicted to be involved in Arp2/3 complex-mediated actin nucleation; positive regulation of double-strand break repair via homologous recombination; and positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within actin filament organization. Predicted to be located in cytoplasm; nucleus; and site of double-strand break. Predicted to be part of Arp2/3 protein complex. Predicted to be active in actin cortical patch. Orthologous to human ACTR2 (actin related protein 2). |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU109103 | True | 227 | lncRNA | 0.40 | 2 | 88210961 | 88212201 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| papolg | papolg | coding | downstream | 8803 | 88178952 ~ 88202158 (-) |
| LOC118966733 | NA | coding | downstream | 46350 | 88159117 ~ 88164611 (-) |
| LOC100499622 | alb1 | coding | downstream | 66495 | 88131038 ~ 88144466 (-) |
| LOC118936685 | LOC106577316 | coding | downstream | 86234 | 88092044 ~ 88124727 (-) |
| pex13 | LOC106592834 | coding | downstream | 145838 | 88054545 ~ 88065123 (-) |
| LOC118966057 | NA | coding | upstream | 15687 | 88224741 ~ 88230342 (-) |
| LOC118966058 | NA | coding | upstream | 19740 | 88231941 ~ 88234672 (-) |
| LOC118936686 | LOC106594327 | coding | upstream | 24380 | 88236581 ~ 88270980 (-) |
| LOC118966063 | NA | coding | upstream | 502672 | 88714598 ~ 88715755 (-) |
| LOC118966064 | NA | coding | upstream | 504117 | 88716318 ~ 88717077 (-) |
| G98501 | NA | non-coding | downstream | 6352 | 88204290 ~ 88204609 (-) |
| G98499 | NA | non-coding | downstream | 13030 | 88197610 ~ 88197931 (-) |
| G98488 | NA | non-coding | downstream | 43649 | 88165837 ~ 88167312 (-) |
| G98478 | NA | non-coding | downstream | 96679 | 88111666 ~ 88114282 (-) |
| G98473 | NA | non-coding | downstream | 108708 | 88101473 ~ 88102253 (-) |
| G98505 | NA | non-coding | upstream | 11130 | 88223331 ~ 88224678 (-) |
| G98514 | NA | non-coding | upstream | 25799 | 88238000 ~ 88238331 (-) |
| G98522 | NA | non-coding | upstream | 41545 | 88253746 ~ 88254060 (-) |
| LOC110531505 | LOC106597820 | other | downstream | 295061 | 87911053 ~ 87919678 (-) |
| G97535 | NA | other | downstream | 915962 | 87294357 ~ 87294999 (-) |
| G97308 | NA | other | downstream | 1422909 | 86787057 ~ 86788052 (-) |
| G97251 | NA | other | downstream | 1587650 | 86566477 ~ 86623311 (-) |
| G98510 | NA | other | upstream | 6628 | 88218829 ~ 88220804 (-) |
| G98549 | NA | other | upstream | 102075 | 88314276 ~ 88314696 (-) |
| G98616 | NA | other | upstream | 339773 | 88551974 ~ 88644067 (-) |
| LOC118966065 | NA | other | upstream | 565338 | 88757265 ~ 88782119 (-) |
| G98878 | NA | other | upstream | 863646 | 89075847 ~ 89076238 (-) |
