XLOC_020413



Basic Information


Item Value
gene id XLOC_020413
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 21786779 ~ 21787648 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042139
tagcaAACTCAATACCATAATGCAAAAAAGCTAACTtcggggtgtccaaactcggtctgtatttatttgtgtttttaccgACATTATTTCAGATCTTCTAtaagtatttttgtaaaaatgaacATCATAAAAAGATATTAAGTGTCAAATTTTGCAGTCCAAATTTTCCAAAGGTGATGCTGATGTGGCAAAGACAAGATGTCCCATTTTGAtgcctaaaataatttaaaaatactttatgttaatactttttgttttttacataagtatgttacagaaaaaat

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042139 True 284 lncRNA 0.29 2 21786779 21787648

Neighbor


gene id symbol gene type direction distance location
XLOC_020412 NA coding upstream 19940 21669165 ~ 21766839 (+)
XLOC_020411 tle2a coding upstream 118947 21618121 ~ 21667832 (+)
XLOC_020410 plpp2b coding upstream 202109 21549419 ~ 21584670 (+)
XLOC_020409 mier2 coding upstream 238922 21516689 ~ 21547857 (+)
XLOC_020408 shdb coding upstream 320971 21398508 ~ 21465808 (+)
XLOC_020414 NA coding downstream 1448 21789096 ~ 21797741 (+)
XLOC_020415 NA coding downstream 35311 21822959 ~ 21823227 (+)
XLOC_020416 NA coding downstream 60638 21848286 ~ 21852131 (+)
XLOC_020417 BX649295.2 coding downstream 102174 21889822 ~ 21911948 (+)
XLOC_020418 gna15.4 coding downstream 163190 21950838 ~ 21957192 (+)
XLOC_020403 NA non-coding upstream 645660 21134709 ~ 21141119 (+)
XLOC_020402 CU693455.2 non-coding upstream 692814 21093851 ~ 21093965 (+)
XLOC_020399 NA non-coding upstream 1212819 20571834 ~ 20573960 (+)
XLOC_020395 NA non-coding upstream 1352762 20433570 ~ 20434017 (+)
XLOC_020427 NA non-coding downstream 690616 22478264 ~ 22629319 (+)
XLOC_020428 NA non-coding downstream 933574 22721222 ~ 22723937 (+)

Expression



Co-expression Network