XLOC_020415



Basic Information


Item Value
gene id XLOC_020415
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 21822959 ~ 21823227 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00041897
GCACTTTGACTTTTAGGTGACTTGTTTATTCAAAGCAACTTAAAGTACATTACAAAGCCAGTCCTTTTATAGAGTAACCTGTAGTTAAAAGGCTGATCTGGATCTACAGTAATTAATCAAATTGAAATCGCATGGCGTGATTTGTAGTAAAAAGGGTTGCACCAATATAGACTTTTTGGCTGATAtcaataaccgataactcttcagacttggaggccgatagccgatatatatatatatatatatatatatatatatatatatatata

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00041897 True 269 lncRNA 0.31 1 21822959 21823227

Neighbor


gene id symbol gene type direction distance location
XLOC_020414 NA coding upstream 25218 21789096 ~ 21797741 (+)
XLOC_020413 NA coding upstream 35311 21786779 ~ 21787648 (+)
XLOC_020412 NA coding upstream 56120 21669165 ~ 21766839 (+)
XLOC_020411 tle2a coding upstream 155127 21618121 ~ 21667832 (+)
XLOC_020410 plpp2b coding upstream 238289 21549419 ~ 21584670 (+)
XLOC_020416 NA coding downstream 25059 21848286 ~ 21852131 (+)
XLOC_020417 BX649295.2 coding downstream 66595 21889822 ~ 21911948 (+)
XLOC_020418 gna15.4 coding downstream 127611 21950838 ~ 21957192 (+)
XLOC_020419 si:ch211-207c7.2 coding downstream 141921 21965148 ~ 21968364 (+)
XLOC_020420 gna15.3 coding downstream 149597 21972824 ~ 21984064 (+)
XLOC_020403 NA non-coding upstream 681840 21134709 ~ 21141119 (+)
XLOC_020402 CU693455.2 non-coding upstream 728994 21093851 ~ 21093965 (+)
XLOC_020427 NA non-coding downstream 655037 22478264 ~ 22629319 (+)
XLOC_020428 NA non-coding downstream 897995 22721222 ~ 22723937 (+)
XLOC_020429 CABZ01039424.1 non-coding downstream 1017331 22840558 ~ 22840675 (+)
XLOC_020430 BX936380.1 non-coding downstream 1132505 22955732 ~ 22955849 (+)

Expression



Co-expression Network