G98644



Basic Information


Item Value
gene id G98644
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 88650675 ~ 88651417 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU109286
TCCTCTCAACCCTGCCAGTGCAGAAATGAATGATGTGTTTTTTCACACCTGTTTCTGCTCAGGAACACTGCAGCACGGTGGTGATGGTAAACCCTGTTTTCCAGAGGGAGAAGTATGTGTGTGTTCCCCTACCAAGGCTACATCTGGGCGCGGGCGCTAGCTAAATTATAACCCTAATTGCATTAATGGACATTATGGCTGAGtgccaaatggcagcctattccctacgtagtgcacaacttttgaccagggactgAAGGGCCTACGTTTCATTaatggagaatagggtgccatttgggatctaGTCTATGCCCTGCAGTTGGCaggtttttttctctccctctctcatttctccctctctcatttctccctctctcttttctccctctctcttttctccctctctcttttctccctctctcatttggCATGTTTTAAAGGGGGATGAAAAAAGAGAAGAAGTGGTTGAGGCGGTTTGGGTTTTTACG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU109286 True 488 lncRNA 0.47 2 88650675 88651417

Neighbor


gene id symbol gene type direction distance location
LOC118936686 LOC106594327 coding downstream 379695 88236581 ~ 88270980 (-)
LOC118966058 NA coding downstream 416405 88231941 ~ 88234672 (-)
LOC118966057 NA coding downstream 420333 88224741 ~ 88230342 (-)
papolg papolg coding downstream 448517 88178952 ~ 88202158 (-)
LOC118966733 NA coding downstream 486064 88159117 ~ 88164611 (-)
LOC118966063 NA coding upstream 63456 88714598 ~ 88715755 (-)
LOC118966064 NA coding upstream 64901 88716318 ~ 88717077 (-)
LOC118966065 NA coding upstream 126900 88757265 ~ 88782119 (-)
ghitm LOC100136239 coding upstream 571733 89223150 ~ 89270371 (-)
fbxl15 fbx37 coding upstream 1146495 89797912 ~ 89803793 (-)
G98643 NA non-coding downstream 909 88646841 ~ 88649766 (-)
G98610 NA non-coding downstream 7240 88638341 ~ 88643435 (-)
G98642 NA non-coding downstream 19643 88627939 ~ 88631032 (-)
G98601 NA non-coding downstream 135832 88514514 ~ 88514843 (-)
G98599 NA non-coding downstream 144960 88505233 ~ 88505715 (-)
G98656 NA non-coding upstream 23616 88675033 ~ 88675369 (-)
G98646 NA non-coding upstream 44850 88696267 ~ 88697751 (-)
G98675 NA non-coding upstream 57564 88708981 ~ 88711103 (-)
G98688 NA non-coding upstream 94313 88745730 ~ 88746010 (-)
G98616 NA other downstream 6608 88551974 ~ 88644067 (-)
G98549 NA other downstream 335979 88314276 ~ 88314696 (-)
G98510 NA other downstream 429871 88218829 ~ 88220804 (-)
pex13 LOC106592834 other downstream 585761 88054545 ~ 88065123 (-)
LOC110531505 LOC106597820 other downstream 734775 87911053 ~ 87919678 (-)
G98878 NA other upstream 424430 89075847 ~ 89076238 (-)
G99035 NA other upstream 635797 89287214 ~ 89290056 (-)
G99595 NA other upstream 1305975 89957392 ~ 89957916 (-)

Expression



Co-expression Network