G98840 (LOC106596237)



Basic Information


Item Value
gene id G98840
gene name LOC106596237
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 89011898 ~ 89012479 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU109511
GGGTCTTCTCTGTATCTGTCAGCAGCTGTGTGTGGTCTCTGTCAGTGCTCAGAGTCAGTGAGCTGCTGGGTTTGGGGGACAGCGTTTTCAGCCCCTCGGGATTCTGGGTCATCTCCAACACGATAGGGTCACTGAGAAGGTCATCATCCTCCCAGTCAAAGTCCTCGTCTTTCGCCACAGTCGTCATGGCGTTCCACTGTCCCACTTCCTCTTTACCAGTACGAGCCGATGAACCAGACGTGCTTCCCCCGCCAGGCTTGACCTCCGACTCTTTGACGAGGTCATTGGCAGTGAGACGGCTGACCCCAACTTGAACCTTGACCTCCTGAGAACAGGTGGAGGCGGTCGACCCTTGGCTGAGCCGTCCGGTGACTCGCTGCGTCGGCCCGTCGAACAGAGCGTTAAGCTCCGCCTCTACCTGCTGGGCTGATGACGACATTGTCGTCGGGCCCTTGGGTTCCTCCCCGTAGCGGTTGTTGTTTATGGTATTGTTTGTGTGTTCAGCGCTCCTCTTCTCTCGGTCCTGCTGGTGCATGTTGATGTCAAACTGCCTGGCCAGCTGCATCAAGTCCTCCACTGAGC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU109511 True 582 lncRNA 0.44 1 89011898 89012479

Neighbor


gene id symbol gene type direction distance location
LOC118966065 NA coding downstream 229779 88757265 ~ 88782119 (-)
LOC118966064 NA coding downstream 294821 88716318 ~ 88717077 (-)
LOC118966063 NA coding downstream 296143 88714598 ~ 88715755 (-)
LOC118936686 LOC106594327 coding downstream 740918 88236581 ~ 88270980 (-)
LOC118966058 NA coding downstream 777628 88231941 ~ 88234672 (-)
ghitm LOC100136239 coding upstream 210671 89223150 ~ 89270371 (-)
fbxl15 fbx37 coding upstream 785433 89797912 ~ 89803793 (-)
LOC118966075 LOC106577395 coding upstream 887859 89900338 ~ 89902518 (-)
LOC110519290 cj104 coding upstream 899819 89912298 ~ 89920458 (-)
LOC118936688 LOC106577347 coding upstream 1096817 90109296 ~ 90115842 (-)
G98843 NA non-coding downstream 2113 89009506 ~ 89009785 (-)
G98834 NA non-coding downstream 8501 89003197 ~ 89003397 (-)
G98795 NA non-coding downstream 62126 88949546 ~ 88949772 (-)
G98792 NA non-coding downstream 64577 88947030 ~ 88947321 (-)
G98750 NA non-coding downstream 139321 88872334 ~ 88872577 (-)
G98845 NA non-coding upstream 5609 89018088 ~ 89019228 (-)
G98846 NA non-coding upstream 7315 89019794 ~ 89021720 (-)
G98852 NA non-coding upstream 14233 89026712 ~ 89027104 (-)
G98860 NA non-coding upstream 20055 89032534 ~ 89033104 (-)
G98861 NA non-coding upstream 24562 89037041 ~ 89037460 (-)
G98616 NA other downstream 367831 88551974 ~ 88644067 (-)
G98549 NA other downstream 697202 88314276 ~ 88314696 (-)
G98510 NA other downstream 791094 88218829 ~ 88220804 (-)
pex13 LOC106592834 other downstream 946984 88054545 ~ 88065123 (-)
G98878 NA other upstream 63368 89075847 ~ 89076238 (-)
G99035 NA other upstream 274735 89287214 ~ 89290056 (-)
G99595 NA other upstream 944913 89957392 ~ 89957916 (-)
G99602 NA other upstream 951394 89963873 ~ 89964205 (-)

Expression



Co-expression Network