G98853


Basic Information

Item Value
gene id G98853
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 89029138 ~ 89029739 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU109530
ACCTTTATGAGGTCACGCCTGTCTCTATGGTGATAGTGGTAGCCAATGACGGGCTGCTGTGGTACTTTCATCTCATCTGTCTCACATTAAGTCCATGCAACAAGGAggagttctctttctctctgtcacacaaacacaccacatgtTCATAGATCTTCATGCACAGGCTGACACATAGGACACTAGAACACatggatgtacacacacacacacACACCACATGTTCATAGAACACATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109530 True 238 lncRNA 0.45 2 89029138 89029739

Neighbor

gene id symbol gene type direction distance location
LOC118966069 NA coding upstream 8538 89018704 ~ 89020600 (+)
si:dkey-78p8.1 LOC106577363 coding upstream 10868 89007456 ~ 89018305 (+)
LOC110518194 LOC106577299 coding upstream 36678 88981098 ~ 88992460 (+)
LOC118966734 NA coding upstream 198886 88829551 ~ 88830252 (+)
LOC118966059 NA coding upstream 300945 88725598 ~ 88728193 (+)
LOC110510724 chst3 coding downstream 241069 89270808 ~ 89288624 (+)
LOC110514249 LOC101463634 coding downstream 558626 89588365 ~ 89663139 (+)
LOC118966071 NA coding downstream 627638 89657377 ~ 89659317 (+)
gpx9 LOC106577309 coding downstream 774169 89803908 ~ 89806519 (+)
LOC110531574 LOC106577308 coding downstream 777537 89807276 ~ 89813481 (+)
G98851 NA non-coding upstream 2044 89026807 ~ 89027094 (+)
G98847 NA non-coding upstream 6059 89022794 ~ 89023079 (+)
G98837 NA non-coding upstream 7546 89020958 ~ 89021592 (+)
G98839 NA non-coding upstream 11271 89014265 ~ 89017867 (+)
G98854 NA non-coding downstream 287 89030026 ~ 89030264 (+)
G98862 NA non-coding downstream 7944 89037683 ~ 89037978 (+)
G98870 NA non-coding downstream 24575 89054314 ~ 89054806 (+)
G98874 NA non-coding downstream 33738 89063477 ~ 89063736 (+)
G98877 NA non-coding downstream 46097 89075836 ~ 89076256 (+)
LOC118966060 LOC106613898 other upstream 284725 88608182 ~ 88744413 (+)
LOC118966062 NA other upstream 379344 88646294 ~ 88649794 (+)
LOC118966061 NA other upstream 385687 88551971 ~ 88647803 (+)
G98104 NA other upstream 884697 88130944 ~ 88165405 (+)
LOC118966052 LOC106577294 other upstream 1106724 87920968 ~ 87928366 (+)
G99160 NA other downstream 428996 89458735 ~ 89459071 (+)
G99246 NA other downstream 629522 89659261 ~ 89663140 (+)
G99440 NA other downstream 810129 89839868 ~ 89841791 (+)
G99466 NA other downstream 878033 89907772 ~ 89908434 (+)

Expression


Co-expression Network