Gene
RNA
| Item | Value |
|---|---|
| gene id | G98865 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 89040472 ~ 89040734 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU109542 | True | 263 | lncRNA | 0.41 | 1 | 89040472 | 89040734 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966065 | NA | coding | downstream | 258353 | 88757265 ~ 88782119 (-) |
| LOC118966064 | NA | coding | downstream | 323395 | 88716318 ~ 88717077 (-) |
| LOC118966063 | NA | coding | downstream | 324717 | 88714598 ~ 88715755 (-) |
| LOC118936686 | LOC106594327 | coding | downstream | 769492 | 88236581 ~ 88270980 (-) |
| LOC118966058 | NA | coding | downstream | 806202 | 88231941 ~ 88234672 (-) |
| ghitm | LOC100136239 | coding | upstream | 182416 | 89223150 ~ 89270371 (-) |
| fbxl15 | fbx37 | coding | upstream | 757178 | 89797912 ~ 89803793 (-) |
| LOC118966075 | LOC106577395 | coding | upstream | 859604 | 89900338 ~ 89902518 (-) |
| LOC110519290 | cj104 | coding | upstream | 871564 | 89912298 ~ 89920458 (-) |
| LOC118936688 | LOC106577347 | coding | upstream | 1068562 | 90109296 ~ 90115842 (-) |
| G98863 | NA | non-coding | downstream | 2489 | 89037697 ~ 89037983 (-) |
| G98861 | NA | non-coding | downstream | 3012 | 89037041 ~ 89037460 (-) |
| G98860 | NA | non-coding | downstream | 7368 | 89032534 ~ 89033104 (-) |
| G98852 | NA | non-coding | downstream | 13368 | 89026712 ~ 89027104 (-) |
| G98846 | NA | non-coding | downstream | 18752 | 89019794 ~ 89021720 (-) |
| G98873 | NA | non-coding | upstream | 19438 | 89060172 ~ 89060395 (-) |
| G98882 | NA | non-coding | upstream | 44164 | 89084898 ~ 89085174 (-) |
| G98930 | NA | non-coding | upstream | 102706 | 89143440 ~ 89143926 (-) |
| G98935 | NA | non-coding | upstream | 108438 | 89149172 ~ 89149459 (-) |
| G98937 | NA | non-coding | upstream | 113972 | 89154706 ~ 89155082 (-) |
| G98616 | NA | other | downstream | 396405 | 88551974 ~ 88644067 (-) |
| G98549 | NA | other | downstream | 725776 | 88314276 ~ 88314696 (-) |
| G98510 | NA | other | downstream | 819668 | 88218829 ~ 88220804 (-) |
| pex13 | LOC106592834 | other | downstream | 975558 | 88054545 ~ 88065123 (-) |
| G98878 | NA | other | upstream | 35113 | 89075847 ~ 89076238 (-) |
| G99035 | NA | other | upstream | 246480 | 89287214 ~ 89290056 (-) |
| G99595 | NA | other | upstream | 916658 | 89957392 ~ 89957916 (-) |
| G99602 | NA | other | upstream | 923139 | 89963873 ~ 89964205 (-) |
