G99274


Basic Information

Item Value
gene id G99274
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 89559130 ~ 89561485 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU110030
AGTTAATCATGACGTTTGTTATGGCCTTGGTCAGAATGGAAACAAAGACTCTAAGAGGAGTTTCGAAAAGTACAGAAGCCTTCCccaggactctgtctctcactctattagaatagtacagtagacttccccaggactctgtctctcactctattagaatagtacagtagacttccccaggactctgtctctcactctattagaatagtacagtagacttccccaggactctgtctctcactccattagaatagtacagtagacttccccaggactctgtctctcactctattagaatagtacagtagacttccccaggactctgtctctcactccattagaatagtacagtagacttccccaggactctgtctctcactccattagaatagtacagtagccttccccaggactctgtctctcactccattagaatagtacagtagacttccccaggactctgtctctcactccattagaatagtacagtagccttccccaggactctgtctctcactccattagaatagtacagtagactctgtctctcactctattagaatagtacagtagacttccccaggactctgtctctcactccattagaatagtacagtagacttccccaggactctttctctcactccattagaatagtacagtagacttccccaggactctttctctcactccattagaatagtacagtagacttccccaggactctgtctctcactccattagaatagtacagtagactctgtctctcactctattagaatagtacagtagacttccccaggactctgtctctcactccattagaatagtacagtagacttccccaggactctttctctcactctattagaatagtacagtagacttccccaggactctgtctctcactctattagaatagtacagtagacttccccaggactctgtctctcactccattagaatagtacagtagacttccccaggactctgtctctcactccattagaatagtacagtagccttccccaggactctgtctctcactccattagaatagtacagtagacttccccaggactctgtctctcactctattagaatagtacagtagacttccccaggactctgtctctcactccattagaatagtacagtagccttccccaggactctgtctctcactccattagaatagtacagtagacttccccaggactctgtctctcactccattagaatagtacagtagacttccccaggactctgtctctcactctattagaatagtacagtagacttccccaggactctgtctctcactccattagaatagtacagtagacttccccaggactctgtctctcactctattagaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110030 True 1381 lncRNA 0.46 3 89559130 89561485

Neighbor

gene id symbol gene type direction distance location
ghitm LOC100136239 coding downstream 288759 89223150 ~ 89270371 (-)
LOC118966065 NA coding downstream 777011 88757265 ~ 88782119 (-)
LOC118966064 NA coding downstream 842053 88716318 ~ 88717077 (-)
LOC118966063 NA coding downstream 843375 88714598 ~ 88715755 (-)
LOC118936686 LOC106594327 coding downstream 1288150 88236581 ~ 88270980 (-)
fbxl15 fbx37 coding upstream 236427 89797912 ~ 89803793 (-)
LOC118966075 LOC106577395 coding upstream 338853 89900338 ~ 89902518 (-)
LOC110519290 cj104 coding upstream 350813 89912298 ~ 89920458 (-)
LOC118936688 LOC106577347 coding upstream 547811 90109296 ~ 90115842 (-)
LOC110515022 LOC106560865 coding upstream 555016 90116501 ~ 90141830 (-)
G99222 NA non-coding downstream 28770 89529500 ~ 89530360 (-)
G99217 NA non-coding downstream 32646 89526117 ~ 89526484 (-)
G99215 NA non-coding downstream 35305 89523384 ~ 89523825 (-)
G99214 NA non-coding downstream 35875 89522655 ~ 89523255 (-)
G99199 NA non-coding downstream 51261 89507669 ~ 89507869 (-)
G99275 NA non-coding upstream 1941 89563426 ~ 89563678 (-)
G99313 NA non-coding upstream 85765 89647250 ~ 89647876 (-)
G99317 NA non-coding upstream 91312 89652797 ~ 89653274 (-)
G99323 NA non-coding upstream 105174 89666659 ~ 89667537 (-)
G99324 NA non-coding upstream 108213 89669698 ~ 89670153 (-)
G99035 NA other downstream 269074 89287214 ~ 89290056 (-)
G98878 NA other downstream 482892 89075847 ~ 89076238 (-)
G98616 NA other downstream 915063 88551974 ~ 88644067 (-)
G99595 NA other upstream 395907 89957392 ~ 89957916 (-)
G99602 NA other upstream 402388 89963873 ~ 89964205 (-)
G100197 NA other upstream 1066048 90625080 ~ 90858972 (-)
LOC110516041 jakmip3 other upstream 1421250 90982735 ~ 91072716 (-)
G100582 NA other upstream 1671255 91232740 ~ 91233788 (-)

Expression


Co-expression Network