Gene
RNA
| Item | Value |
|---|---|
| gene id | G99275 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 89563426 ~ 89563678 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LIM domain transcription factor LMO4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU110031 | True | 253 | lncRNA | 0.46 | 1 | 89563426 | 89563678 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ghitm | LOC100136239 | coding | downstream | 293055 | 89223150 ~ 89270371 (-) |
| LOC118966065 | NA | coding | downstream | 781307 | 88757265 ~ 88782119 (-) |
| LOC118966064 | NA | coding | downstream | 846349 | 88716318 ~ 88717077 (-) |
| LOC118966063 | NA | coding | downstream | 847671 | 88714598 ~ 88715755 (-) |
| LOC118936686 | LOC106594327 | coding | downstream | 1292446 | 88236581 ~ 88270980 (-) |
| fbxl15 | fbx37 | coding | upstream | 234234 | 89797912 ~ 89803793 (-) |
| LOC118966075 | LOC106577395 | coding | upstream | 336660 | 89900338 ~ 89902518 (-) |
| LOC110519290 | cj104 | coding | upstream | 348620 | 89912298 ~ 89920458 (-) |
| LOC118936688 | LOC106577347 | coding | upstream | 545618 | 90109296 ~ 90115842 (-) |
| LOC110515022 | LOC106560865 | coding | upstream | 552823 | 90116501 ~ 90141830 (-) |
| G99274 | NA | non-coding | downstream | 1941 | 89559130 ~ 89561485 (-) |
| G99222 | NA | non-coding | downstream | 33066 | 89529500 ~ 89530360 (-) |
| G99217 | NA | non-coding | downstream | 36942 | 89526117 ~ 89526484 (-) |
| G99215 | NA | non-coding | downstream | 39601 | 89523384 ~ 89523825 (-) |
| G99214 | NA | non-coding | downstream | 40171 | 89522655 ~ 89523255 (-) |
| G99313 | NA | non-coding | upstream | 83572 | 89647250 ~ 89647876 (-) |
| G99317 | NA | non-coding | upstream | 89119 | 89652797 ~ 89653274 (-) |
| G99323 | NA | non-coding | upstream | 102981 | 89666659 ~ 89667537 (-) |
| G99324 | NA | non-coding | upstream | 106020 | 89669698 ~ 89670153 (-) |
| G99521 | NA | non-coding | upstream | 232978 | 89796656 ~ 89879927 (-) |
| G99035 | NA | other | downstream | 273370 | 89287214 ~ 89290056 (-) |
| G98878 | NA | other | downstream | 487188 | 89075847 ~ 89076238 (-) |
| G98616 | NA | other | downstream | 919359 | 88551974 ~ 88644067 (-) |
| G99595 | NA | other | upstream | 393714 | 89957392 ~ 89957916 (-) |
| G99602 | NA | other | upstream | 400195 | 89963873 ~ 89964205 (-) |
| G100197 | NA | other | upstream | 1063855 | 90625080 ~ 90858972 (-) |
| LOC110516041 | jakmip3 | other | upstream | 1419057 | 90982735 ~ 91072716 (-) |
| G100582 | NA | other | upstream | 1669062 | 91232740 ~ 91233788 (-) |
