G99555


Basic Information

Item Value
gene id G99555
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 89843542 ~ 89845164 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU110371
TTACGCACCACTTACAATTCACAAAGATATTTCAAGATATTTATTCATGGGTTTCTTTGCCATAATTCATATTTCAGTCGATAACCGCCACGTTCTTCAATCAGCATGAAATGTCGAGTGTAACCACGCCAAAGCTGTTTACACTGGTGTGCTCATTACAGTTTATACACAACAGAAGCCAGCACACTATAAACAGGGGGCAAAGCCAACAACCAGGACACACACAGTTCTCATACAGTATCTCAATCACACAAGCTAGCTGACAGCAGTGGGCCGCTCTATAGTGACTAACGGGGACTGACTATAAAAAACATCCAGCAACTCCACAAGAATCATCAAATTACATTCTGTTGTTGCATAGCTCTGGACCAGGGCGTAATGTGCAGGCTCTGACACAGCTCTGAGTCAACAAGCTGCACGTAACACCCTGGATCAGAGCTAGTCGTTGCAGTGCTTTGGCCTGAAAAACGGAACAAAGTAAGAGATGGCACACTGGTCTGTAGAGCACACTGGTCTGTAGAGCACACTGGTCTGTAGAGCACACTGGTCTGTAGAGCACACTGGGCTGTAGAGCACACTGGGCTGTAGAGCACACTGGGCTGTCAGTGAAAAGTAAAAATTTCAGCGCTGTGGTACAGTATGCATTACAAAAGTGTATATAACTCATTCACTCTTCCTAACTATTGTAAAAATCAGCTGGACGTTGTGTGGTTTGTTAAGGAAAGATGAGGTAGGAAGGTGGACGAAAACAACCTCGCTCTCCAAAGTCTTCCCTTAGTTGGATGTGTTACCATGTTTAGAACTACTGACAGCCAGAGAATCCAAGCCCACATTGTTCAGTCACATTTGCGTATCTTTCTCCACTCTCAAACATATGACATTAAAATCCTCAGCGATCTACAATCCTCCCACATCAGTAAACCCCCACCTCTTTAATATTTAACATCAGGTATCTTCCCATCGAAAAGCTAAAAGGACTCAACTTCTTTAGTACTATTGGGTGTTTTGCTGTTGATAACCACCCCAGTGACTCGTCTTCTCAGGAGAGAAGAACACCTCTCGTCATCAGCCAAGTCTGAAACCTTTTCAATGAGTCGGCTTTAGTCAAGCGAAAACCACACATCTGCAATCATGTTCTTTATCAAAGCACATTTCAACAgctgaaaaataaatacatatctaATCTATAACATTGTGATCCATCCATATGATAACACTGAAGGCTGTTTTTATCTTGGTGTGTTTTgagtgttccaaatggcactctactccctatatagagcactacttttgacaagagccctcgGGGGCCCTCATAAATCATAGGGCCCACGGGGCCCGTAAAGAGCCCAtagggtctggtcaaaagtagagcattaTAGGAAATAAGGTTTATTCTAGAAGCCTGCCTTGGTGTGGGATCAGTGGTCAGACGCCCAGCTTGTTGGCGATGGTCATGACCACTTTGAGGATGGGCATGAAGGCTTGGATCTCGCTGAAGTTGCTGCTGGTGACCACAGCAGTGTGGACCTCCAGGCCACGCTGGTAGTTCTGGCCCGCCACGCAGCGGCTGATCTCATGTAAACCCCCCAGGATGTTGTTA
>TU110372
TTACGCACCACTTACAATTCACAAAGATATTTCAAGATATTTATTCATGGGTTTCTTTGCCATAATTCATATTTCAGTCGATAACCGCCACGTTCTTCAATCAGCATGAAATGTCGAGTGTAACCACGCCAAAGCTGTTTACACTGGTGTGCTCATTACAGTTTATACACAACAGAAGCCAGCACACTATAAACAGGGGGCAAAGCCAACAACCAGGACACACACAGTTCTCATACAGTATCTCAATCACACAAGCTAGCTGACAGCAGTGGGCCGCTCTATAGTGACTAACGGGGACTGACTATAAAAAACATCCAGCAACTCCACAAGAATCATCAAATTACATTCTGTTGTTGCATAGCTCTGGACCAGGGCGTAATGTGCAGGCTCTGACACAGCTCTGAGTCAACAAGCTGCACGTAACACCCTGGATCAGAGCTAGTCGTTGCAGTGCTTTGGCCTGAAAAACGGAACAAAGTAAGAGATGGCACACTGGTCTGTAGAGCACACTGGTCTGTAGAGCACACTGGTCTGTAGAGCACACTGGTCTGTAGAGCACACTGGGCTGTCAGTGAAAAGTAAAAATTTCAGCGCTGTGGTACAGTATGCATTACAAAAGTGTATATAACTCATTCACTCTTCCTAACTATTGTAAAAATCAGCTGGACGTTGTGTGGTTTGTTAAGGAAAGATGAGGTAGGAAGGTGGACGAAAACAACCTCGCTCTCCAAAGTCTTCCCTTAGTTGGATGTGTTACCATGTTTAGAACTACTGACAGCCAGAGAATCCAAGCCCACATTGTTCAGTCACATTTGCGTATCTTTCTCCACTCTCAAACATATGACATTAAAATCCTCAGCGATCTACAATCCTCCCACATCAGTAAACCCCCACCTCTTTAATATTTAACATCAGGTATCTTCCCATCGAAAAGCTAAAAGGACTCAACTTCTTTAGTACTATTGGGTGTTTTGCTGTTGATAACCACCCCAGTGACTCGTCTTCTCAGGAGAGAAGAACACCTCTCGTCATCAGCCAAGTCTGAAACCTTTTCAATGAGTCGGCTTTAGTCAAGCGAAAACCACACATCTGCAATCATGTTCTTTATCAAAGCACATTTCAACAgctgaaaaataaatacatatctaATCTATAACATTGTGATCCATCCATATGATAACACTGAAGGCTGTTTTTATCTTGGTGTGTTTTgagtgttccaaatggcactctactccctatatagagcactacttttgacaagagccctcgGGGGCCCTCATAGACCCCTCGGGGCCCTCATAAATCATAGGGCCCACGGGGCCCGTAAAGAGCCCAtagggtctggtcaaaagtagagcattaTAGGAAATAAGGTTTATTCTAGAAGCCTGCCTTGGTGTGGGATCAGTGGTCAGACGCCCAGCTTGTTGGCGATGGTCATGACCACTTTGAGGATGGGCATGAAGGCTTGGATCTCGCTGAAGTTGCTGCTGGTGACCACAGCAGTGTGGACCTCCAGGCCACGCTGGTAGTTCTGGCCCGCCACGCAGCGGCTGATCTCATGTAAACCCCCCAGGATGTTGTTA

Function

NR:

description
PREDICTED: protein transport protein Sec31A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110371 False 1603 lncRNA 0.45 2 89843542 89845164
TU110372 True 1589 lncRNA 0.45 2 89843542 89845164

Neighbor

gene id symbol gene type direction distance location
fbxl15 fbx37 coding downstream 39749 89797912 ~ 89803793 (-)
ghitm LOC100136239 coding downstream 573171 89223150 ~ 89270371 (-)
LOC118966065 NA coding downstream 1061423 88757265 ~ 88782119 (-)
LOC118966064 NA coding downstream 1126465 88716318 ~ 88717077 (-)
LOC118966063 NA coding downstream 1127787 88714598 ~ 88715755 (-)
LOC118966075 LOC106577395 coding upstream 55174 89900338 ~ 89902518 (-)
LOC110519290 cj104 coding upstream 67134 89912298 ~ 89920458 (-)
LOC118936688 LOC106577347 coding upstream 264132 90109296 ~ 90115842 (-)
LOC110515022 LOC106560865 coding upstream 271337 90116501 ~ 90141830 (-)
LOC110515023 LOC106594692 coding upstream 297280 90142444 ~ 90150699 (-)
G99549 NA non-coding downstream 9490 89833760 ~ 89834052 (-)
G99531 NA non-coding downstream 41109 89801470 ~ 89802433 (-)
G99324 NA non-coding downstream 173389 89669698 ~ 89670153 (-)
G99323 NA non-coding downstream 176005 89666659 ~ 89667537 (-)
G99562 NA non-coding upstream 17397 89862561 ~ 89862830 (-)
G99565 LOC106597856 non-coding upstream 19454 89864618 ~ 89872837 (-)
G99566 NA non-coding upstream 21309 89866473 ~ 89867725 (-)
G99518 NA non-coding upstream 28595 89873759 ~ 89874904 (-)
G99570 LOC106583738 non-coding upstream 38682 89883846 ~ 89886043 (-)
G99035 NA other downstream 553486 89287214 ~ 89290056 (-)
G98878 NA other downstream 767304 89075847 ~ 89076238 (-)
G98616 NA other downstream 1199475 88551974 ~ 88644067 (-)
G99595 NA other upstream 112228 89957392 ~ 89957916 (-)
G99602 NA other upstream 118709 89963873 ~ 89964205 (-)
G100197 NA other upstream 782369 90625080 ~ 90858972 (-)
LOC110516041 jakmip3 other upstream 1137571 90982735 ~ 91072716 (-)
G100582 NA other upstream 1387576 91232740 ~ 91233788 (-)

Expression


Co-expression Network