Gene
RNA
| Item | Value |
|---|---|
| gene id | G99470 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 89915080 ~ 89918120 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| eukaryotic translation initiation factor 3 subunit A isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU110265 | False | 572 | TUCP | 0.37 | 2 | 89915080 | 89918120 |
| TU110264 | True | 253 | lncRNA | 0.50 | 2 | 89916413 | 89918120 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510825 | djb12 | coding | upstream | 16963 | 89883039 ~ 89899450 (+) |
| LOC110531805 | LOC106597856 | coding | upstream | 42427 | 89847512 ~ 89873986 (+) |
| LOC118936687 | LOC106577393 | coding | upstream | 71217 | 89820375 ~ 89845196 (+) |
| LOC118966074 | NA | coding | upstream | 79186 | 89835279 ~ 89837227 (+) |
| LOC110531574 | LOC106577308 | coding | upstream | 102932 | 89807276 ~ 89813481 (+) |
| LOC110489354 | LOC106592879 | coding | downstream | 2341 | 89920461 ~ 89970659 (+) |
| LOC118966076 | spock2 | coding | downstream | 64447 | 89982567 ~ 90102920 (+) |
| LOC110518596 | pald1 | coding | downstream | 239140 | 90157260 ~ 90317809 (+) |
| LOC110531531 | LOC106577352 | coding | downstream | 424315 | 90342435 ~ 90467909 (+) |
| LOC110532996 | LOC106577384 | coding | downstream | 612171 | 90530291 ~ 90542247 (+) |
| G99469 | NA | non-coding | upstream | 4203 | 89911989 ~ 89912210 (+) |
| G99468 | NA | non-coding | upstream | 6222 | 89909863 ~ 89910191 (+) |
| G99464 | NA | non-coding | upstream | 10440 | 89905758 ~ 89905973 (+) |
| G99463 | NA | non-coding | upstream | 12119 | 89903198 ~ 89904294 (+) |
| G99430 | NA | non-coding | upstream | 36487 | 89874972 ~ 89879926 (+) |
| G99473 | NA | non-coding | downstream | 8839 | 89926959 ~ 89927165 (+) |
| G99474 | NA | non-coding | downstream | 9267 | 89927387 ~ 89927591 (+) |
| G99476 | NA | non-coding | downstream | 13521 | 89931641 ~ 89931906 (+) |
| G99487 | NA | non-coding | downstream | 39245 | 89957365 ~ 89958340 (+) |
| G99466 | NA | other | upstream | 7979 | 89907772 ~ 89908434 (+) |
| G99440 | NA | other | upstream | 74622 | 89839868 ~ 89841791 (+) |
| G99246 | NA | other | upstream | 255992 | 89659261 ~ 89663140 (+) |
| G99160 | NA | other | upstream | 457342 | 89458735 ~ 89459071 (+) |
| LOC110510724 | chst3 | other | upstream | 628646 | 89270808 ~ 89288624 (+) |
| G99484 | NA | other | downstream | 31319 | 89949439 ~ 89950884 (+) |
| G99486 | NA | other | downstream | 36906 | 89955026 ~ 89955619 (+) |
| G99488 | NA | other | downstream | 45753 | 89963873 ~ 89964443 (+) |
