XLOC_020434


Basic Information

Item Value
gene id XLOC_020434
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 23384198 ~ 23384456 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041901
TAAACAACAGGAAAGGAAACGCCATGATgtacattaattttaaaaatgcgcaaaaaaaaaagacGTATGCACATAAATAAGtaacataaatgtattgttcggTAAGAAATAATGCGCATagactacgatggaaacacttaccgaacaaattccagtctgcgcattaaaaaaagtcatatgattttgttaaaagagatcatgtgatgataaaaatatgaatagacaaaccagcaggcggCTGAGTACATTGTaaatatct

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041901 True 259 lncRNA 0.32 1 23384198 23384456

Neighbor

gene id symbol gene type direction distance location
XLOC_020432 NA coding upstream 121153 23228710 ~ 23263045 (+)
XLOC_020431 BX469928.1 coding upstream 288394 23095688 ~ 23095804 (+)
XLOC_020430 BX936380.1 coding upstream 428349 22955732 ~ 22955849 (+)
XLOC_020429 CABZ01039424.1 coding upstream 543523 22840558 ~ 22840675 (+)
XLOC_020428 NA coding upstream 660261 22721222 ~ 22723937 (+)
XLOC_020435 NA coding downstream 99981 23484437 ~ 23489879 (+)
XLOC_020436 CR388178.2 coding downstream 107870 23492326 ~ 23493332 (+)
XLOC_020437 aspm coding downstream 162470 23546926 ~ 23582605 (+)
XLOC_020438 b3galt2 coding downstream 773351 24157807 ~ 24169089 (+)
XLOC_020439 NA coding downstream 810565 24195021 ~ 24197050 (+)
XLOC_020445 BX784032.1 non-coding downstream 1107171 24491627 ~ 24500269 (+)
XLOC_020451 NA non-coding downstream 1329797 24714253 ~ 24851829 (+)

Expression


Co-expression Network