G100023


Basic Information

Item Value
gene id G100023
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 90197603 ~ 90199466 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU111049
gtaacatcatcaatgtgaagtaacaacatcaatgtgaagtaacaaggggtaacaacatcaatgtgaagtaaCAAGGGGTAACAACATAAATGTGAAGTAACAAGGGgtaacaacatcaatgtgaagtaacaaggggtaacaacatcaatgtgaagtaacaaggggtaacaacaacaacaatgtgaAGTAACAAcaacatcaatgtgaagtaacaaggggtaacaacaacatcaatgtgaagtaacaaggggtaacaacatcaatgtgaagtaaCAAGGGGTAACAACAACAATGTGAAgtaacaacatcaatgtgaagtaacaaggggtaacaacatcaatgtgaagtaacaaggggtaacaacatcaatgtgaagtaaCAAGGGGTAACAACAACAATGTGAAgtaacaacatcaatgtgaagtaacaaggggtaacaacatcaatgtgaagtaacaaggggtaacaacatcaatgtgaagtaacaaggggtaacaacatcaatgtgaagtaacaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111049 True 519 lncRNA 0.62 2 90197603 90199466

Neighbor

gene id symbol gene type direction distance location
LOC110515024 LOC106613759 coding downstream 41285 90151430 ~ 90156318 (-)
LOC110515023 LOC106594692 coding downstream 46904 90142444 ~ 90150699 (-)
LOC110515022 LOC106560865 coding downstream 55773 90116501 ~ 90141830 (-)
LOC118936688 LOC106577347 coding downstream 81761 90109296 ~ 90115842 (-)
LOC110519290 cj104 coding downstream 277145 89912298 ~ 89920458 (-)
LOC110532927 LOC106577426 coding upstream 283255 90482721 ~ 90498148 (-)
LOC110531748 polr3a coding upstream 348774 90548240 ~ 90602774 (-)
LOC118966735 LOC106564289 coding upstream 446512 90645978 ~ 90657019 (-)
LOC118966736 LOC106585883 coding upstream 494113 90693579 ~ 90695233 (-)
LOC118966737 LOC106577420 coding upstream 495815 90695281 ~ 90696935 (-)
G99957 NA non-coding downstream 20294 90176784 ~ 90177309 (-)
G99954 NA non-coding downstream 46409 90101063 ~ 90151194 (-)
G99995 NA non-coding downstream 60113 90124595 ~ 90137490 (-)
G99951 NA non-coding downstream 88401 90106061 ~ 90109202 (-)
G99991 NA non-coding downstream 91978 90104240 ~ 90105625 (-)
G100051 NA non-coding upstream 56349 90255815 ~ 90256156 (-)
G100076 NA non-coding upstream 109447 90308913 ~ 90310511 (-)
G100062 NA non-coding upstream 114974 90314440 ~ 90316871 (-)
G100096 NA non-coding upstream 152895 90352361 ~ 90353162 (-)
G100100 NA non-coding upstream 164588 90364054 ~ 90364415 (-)
G99602 NA other downstream 233398 89963873 ~ 89964205 (-)
G99595 NA other downstream 239687 89957392 ~ 89957916 (-)
G99035 NA other downstream 907547 89287214 ~ 89290056 (-)
ghitm LOC100136239 other downstream 945515 89223150 ~ 89270371 (-)
G98878 NA other downstream 1121365 89075847 ~ 89076238 (-)
G100197 NA other upstream 428067 90625080 ~ 90858972 (-)
LOC110516041 jakmip3 other upstream 783269 90982735 ~ 91072716 (-)
G100582 NA other upstream 1033274 91232740 ~ 91233788 (-)
LOC110531398 glrx3 other upstream 1593113 91791792 ~ 91832379 (-)
G102060 NA other upstream 2392115 92591581 ~ 92595514 (-)

Expression


Co-expression Network