G100062


Basic Information

Item Value
gene id G100062
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 90314440 ~ 90316871 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU111093
ACTGCTGTGtggttccatttctccaggtccatccctcagctgtttaccgaaACAGGTGACAGAGAGACTGCTTCGTTGTCGTTTCAATCCCATATTAACCCTTTAAAAAGGGGGAATTCACAGCTGAGAGCACACAAAGCGTCCATGCCACCACTGTTCTGGTAAAAGGCAGAGGGACGGGGCTGGAacaatgtaaccactcaaattcatagagccATGGATACAAGGAcagaccatccatgatatcaacattatagtttaaccatgttttgaggctatacagggTTTACATTGACATTCTTTTACAAACCttggagtaaaacaagcgtatattttggggttctgatggggtacgacagttggaTTTAACTCGAGCCATttacaagttatattcttcaaggaTCAATTGGTATATATCATTATTGAAGGAAAAATATATCTAAAAGATGGATGAACCTGATGCAGATTAGCCCTTTAATGAGAGGAGAAACCGCTGTGAAGAAGTGAGGACTGAGACACATGCAAACAGCAGTAAAACACAGAGCAGAAGCTTAGCTTTGGCAGCATCTACAGCAGTTTGGCAAACGAATACCTGGGAGTGGACTTGGAGACAACCGATACTGTATGTCGATTAAAAGTaacagaaatgtattccatctaAACCAATAAGCTGTTTGTTTTAAAAGTCTGTAGTTTCAACTATATTTTAAACTGGAGAAACGTTCCAATACAGACTAACACTAATACTGTCTTCTGATTAAGGTGGTGTCTATTTAACTGGCAGAATATTTACGGAGGTGGAGTTCCGCTAGCCCAAAAGTTGAAGCCTTTCCCTACCTCGAACCCTTACCGTAACCTCAAATTAACCTTAACATAACCTCAAAACTAACCTTAACATAACCTCAAAACTAACCTTAACATAACCTCAAACTAACCTTAACCTCAAACTAACCTTAACATAACATCAAAATAACCTTACCATAACCTCAAACTAACCTTAACATAACCTCAAACTAACCTTAACATAACCTCAAACTAACCTTAACATAACCTCAAACTAACCTTAACATAACCCTGGtttctaaccctaaacgtaaccctaCTTTAACCCTTCATTTCAACCCCTAATGACTAAGCTGTTTGTTCTGCCAGGTGAATATAAACCTCCTCTGATAAAACCTATAGGGTCCATACTAGTAAACCTATAGGGTCCAGACTAGTAAACCTATAGGGTCCATACTAGTAAACCTATAGGGTCCATACTAGTAAACCTATAGGGTCCATACTAGTAAACCTATAGGGTCCATACTAGTAAACCTATAGGGTCCATACTAGTAAACCTATAGGGTCCATACTAGTAAACATATAGGGTCCATACTAGTAAACCTATAGGGTCCATACTAGTAAGGCAGTTCTCACCAAGGGGGCAAAATATGAATGAATTCTCCTCCTATATTAACAATGGAACAATAGAGCAAATGAGACGTAAAAATGTCAGCTTGAATCTCGGCGGCAGTCAGAGCAGAAGCATCAGAACCAGGAAATACCGACTGACAGTACTGAAACATCCATTCTAATACTAATTAACATTGGTAGTGGGTTTGTAAAAAGCAGTATTATAATAATACAGTATCAGAGTGATACGAGGGTAACAATACAAAGCATTATTACATTTCAAAATACAAAGCATTATTAAATTTTAAaggtatatataaaaataaaataaaaagcacaGGAGGACATAGGTTGTataaaatggcaccctagtccctttaGAGTGcagagggccctggtcaaaagtagtgaactatacagggaatagagtACCACTTCAGAAGCAGCCATAGTCTGGCGGTTCACAGTGATCTCTCCTCAGCTCAGATCAACGCCCCCCTGAAGGGACGTGATTGGATGTTCTGTCGTTGCCACCGGCAGCGGAGCCTGGCAAGTGGCGTGTCCCGAAGGTTCTCAAACTCGGAGAAACCCAGCTGGTTGAGAAGGTCGTACACCCCGGCCCTGGCTG

Function

NR:

description
PREDICTED: paladin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111093 True 2023 lncRNA 0.40 3 90314440 90316871

Neighbor

gene id symbol gene type direction distance location
LOC110515024 LOC106613759 coding downstream 158122 90151430 ~ 90156318 (-)
LOC110515023 LOC106594692 coding downstream 163741 90142444 ~ 90150699 (-)
LOC110515022 LOC106560865 coding downstream 172610 90116501 ~ 90141830 (-)
LOC118936688 LOC106577347 coding downstream 198598 90109296 ~ 90115842 (-)
LOC110519290 cj104 coding downstream 393982 89912298 ~ 89920458 (-)
LOC110532927 LOC106577426 coding upstream 165850 90482721 ~ 90498148 (-)
LOC110531748 polr3a coding upstream 231369 90548240 ~ 90602774 (-)
LOC118966735 LOC106564289 coding upstream 329107 90645978 ~ 90657019 (-)
LOC118966736 LOC106585883 coding upstream 376708 90693579 ~ 90695233 (-)
LOC118966737 LOC106577420 coding upstream 378410 90695281 ~ 90696935 (-)
G100076 NA non-coding downstream 3929 90308913 ~ 90310511 (-)
G100051 NA non-coding downstream 58284 90255815 ~ 90256156 (-)
G100024 NA non-coding downstream 114587 90198025 ~ 90199853 (-)
G100023 NA non-coding downstream 114974 90197603 ~ 90199466 (-)
G99957 NA non-coding downstream 137131 90176784 ~ 90177309 (-)
G100096 NA non-coding upstream 35490 90352361 ~ 90353162 (-)
G100100 NA non-coding upstream 47183 90364054 ~ 90364415 (-)
G100101 NA non-coding upstream 48033 90364904 ~ 90365215 (-)
G100102 NA non-coding upstream 48504 90365375 ~ 90365906 (-)
G100109 NA non-coding upstream 64887 90381758 ~ 90381971 (-)
G99602 NA other downstream 350235 89963873 ~ 89964205 (-)
G99595 NA other downstream 356524 89957392 ~ 89957916 (-)
G99035 NA other downstream 1024384 89287214 ~ 89290056 (-)
ghitm LOC100136239 other downstream 1062352 89223150 ~ 89270371 (-)
G98878 NA other downstream 1238202 89075847 ~ 89076238 (-)
G100197 NA other upstream 310662 90625080 ~ 90858972 (-)
LOC110516041 jakmip3 other upstream 665864 90982735 ~ 91072716 (-)
G100582 NA other upstream 915869 91232740 ~ 91233788 (-)
LOC110531398 glrx3 other upstream 1475708 91791792 ~ 91832379 (-)
G102060 NA other upstream 2274710 92591581 ~ 92595514 (-)

Expression


Co-expression Network