G100101



Basic Information


Item Value
gene id G100101
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 90364904 ~ 90365215 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU111138
tctcagagggggaacagctcccaacttcccatagtcagtcctctctcctctctcagagggggaacatctcccaacttcccatagtcagtcctctctcctctctcagagggggaacatctcccaacaccctatagtcagtcctctctcctctctcagagggggaacagctcccaacttcccatagtcagtcctctctcctctctcaaagggggaacagctcccaacttcccatagtcagtcctctctcctctctcaaagggggaacatctcccaacaccctatagtcagttctctctcctctctcagaggggg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU111138 True 312 lncRNA 0.54 1 90364904 90365215

Neighbor


gene id symbol gene type direction distance location
LOC110515024 LOC106613759 coding downstream 208586 90151430 ~ 90156318 (-)
LOC110515023 LOC106594692 coding downstream 214205 90142444 ~ 90150699 (-)
LOC110515022 LOC106560865 coding downstream 223074 90116501 ~ 90141830 (-)
LOC118936688 LOC106577347 coding downstream 249062 90109296 ~ 90115842 (-)
LOC110519290 cj104 coding downstream 444446 89912298 ~ 89920458 (-)
LOC110532927 LOC106577426 coding upstream 117506 90482721 ~ 90498148 (-)
LOC110531748 polr3a coding upstream 183025 90548240 ~ 90602774 (-)
LOC118966735 LOC106564289 coding upstream 280763 90645978 ~ 90657019 (-)
LOC118966736 LOC106585883 coding upstream 328364 90693579 ~ 90695233 (-)
LOC118966737 LOC106577420 coding upstream 330066 90695281 ~ 90696935 (-)
G100100 NA non-coding downstream 489 90364054 ~ 90364415 (-)
G100096 NA non-coding downstream 11742 90352361 ~ 90353162 (-)
G100062 NA non-coding downstream 48033 90314440 ~ 90316871 (-)
G100076 NA non-coding downstream 54393 90308913 ~ 90310511 (-)
G100051 NA non-coding downstream 108748 90255815 ~ 90256156 (-)
G100102 NA non-coding upstream 160 90365375 ~ 90365906 (-)
G100109 NA non-coding upstream 16543 90381758 ~ 90381971 (-)
G100110 LOC106572245 non-coding upstream 16851 90382066 ~ 90384359 (-)
G100115 NA non-coding upstream 25281 90390496 ~ 90391115 (-)
G100117 NA non-coding upstream 27287 90392502 ~ 90392979 (-)
G99602 NA other downstream 400699 89963873 ~ 89964205 (-)
G99595 NA other downstream 406988 89957392 ~ 89957916 (-)
G99035 NA other downstream 1074848 89287214 ~ 89290056 (-)
ghitm LOC100136239 other downstream 1112816 89223150 ~ 89270371 (-)
G98878 NA other downstream 1288666 89075847 ~ 89076238 (-)
G100197 NA other upstream 262318 90625080 ~ 90858972 (-)
LOC110516041 jakmip3 other upstream 617520 90982735 ~ 91072716 (-)
G100582 NA other upstream 867525 91232740 ~ 91233788 (-)
LOC110531398 glrx3 other upstream 1427364 91791792 ~ 91832379 (-)
G102060 NA other upstream 2226366 92591581 ~ 92595514 (-)

Expression



Co-expression Network