G100198


Basic Information

Item Value
gene id G100198
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 90637738 ~ 90741123 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU111354
aggacatgcactatcaactgagTCAATGTTGACATTGTGCAGTAACAACACTTCAACTAAACTCACTAAATGTTTTGTAATGTCTCCTTGGGACTGTAACCTTTTCAGAGTATTTGACTAAGTCTGTGACTCACCGCTTCCTCAGCCTGCCTCTTGTAGGCCTTCACTTTCATCTGCAGCTTATCTACCAGGTCCTGAAGTCTGGCAACGTTCTTCTTATCCTCCTCAGTCTGGCAACTGAGCTCCTTGACTCTGCGCTCATACTTGCGGACTCCCTTGACCGCGTCTACACCTCTTCTCTGCTCGGCCTCCACCTCAGTCTCGAGCTCACGCACCTTGGACTCCCTTGACCGCGTCTACACCTCTTCTCTGCTCGGCCTCCACCTCAGTCTCGAGCTCACGCACCTTTGTGGACG
>TU111355
ATCCACCCTGCTGTTAACTCACCCTGGACTCCAGTTTCTGGAGCTGCTTCTTGCCTCCCTTCATGGCCAGATTCTCAGCCTCATCCAGACGGTGCTGCAGGTCCTTGACTGTGACCTCCaggttcttcttcatcctctccaggtgagagctggtgtcctgctccttcttcagATTCTCAGCCTCATCCAGACGGTGCTGCAGGTCCTTGACTGTGACCTCCaggttcttcttcatcctctccaggtgagagctggtgtcctgctccttcttcagctcctcaGCCATCATGGCCGCCTGGAATGGTAGTTAGTTTCATTTATGCACCAACTGGCACCAATCATAAAGCTCCTTTGGGATCTTTGGTGTGGTTAAACCAGC

Function

NR:

description
myosin heavy chain, skeletal muscle-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU111354 False 416 lncRNA 0.51 4 90637738 90741123
TU111355 True 379 lncRNA 0.53 2 90688074 90740440

Neighbor

gene id symbol gene type direction distance location
LOC110531748 polr3a coding downstream 34964 90548240 ~ 90602774 (-)
LOC110532927 LOC106577426 coding downstream 139590 90482721 ~ 90498148 (-)
LOC110515024 LOC106613759 coding downstream 481420 90151430 ~ 90156318 (-)
LOC110515023 LOC106594692 coding downstream 487039 90142444 ~ 90150699 (-)
LOC110515022 LOC106560865 coding downstream 495908 90116501 ~ 90141830 (-)
LOC118966738 LOC106594844 coding upstream 4270 90745393 ~ 90746606 (-)
LOC118966739 LOC106577420 coding upstream 5529 90746652 ~ 90748391 (-)
LOC110513773 LOC107083051 coding upstream 62201 90803324 ~ 90813931 (-)
LOC118936689 dpysl4 coding upstream 178872 90919995 ~ 90970591 (-)
LOC110516041 jakmip3 coding upstream 242144 90982735 ~ 91072716 (-)
G100216 NA non-coding downstream 55514 90581994 ~ 90582224 (-)
G100215 NA non-coding downstream 56352 90581164 ~ 90581386 (-)
G100207 NA non-coding downstream 61486 90575532 ~ 90576252 (-)
G100192 NA non-coding downstream 71794 90564801 ~ 90565944 (-)
G100172 NA non-coding downstream 112106 90525344 ~ 90525632 (-)
G100201 NA non-coding upstream 292 90741415 ~ 90798211 (-)
G100204 NA non-coding upstream 10023 90751146 ~ 90772190 (-)
G100271 NA non-coding upstream 126367 90867490 ~ 90867760 (-)
G100278 LOC106592262 non-coding upstream 143693 90884816 ~ 90890245 (-)
G100282 NA non-coding upstream 154564 90895687 ~ 90898053 (-)
G99602 NA other downstream 673533 89963873 ~ 89964205 (-)
G99595 NA other downstream 679822 89957392 ~ 89957916 (-)
G99035 NA other downstream 1347682 89287214 ~ 89290056 (-)
ghitm LOC100136239 other downstream 1385650 89223150 ~ 89270371 (-)
G98878 NA other downstream 1561500 89075847 ~ 89076238 (-)
G100582 NA other upstream 491617 91232740 ~ 91233788 (-)
LOC110531398 glrx3 other upstream 1051456 91791792 ~ 91832379 (-)
G102060 NA other upstream 1850458 92591581 ~ 92595514 (-)
G102083 NA other upstream 1896175 92637298 ~ 92638881 (-)

Expression


Co-expression Network