G99880


Basic Information

Item Value
gene id G99880
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 90643871 ~ 90802329 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU110860
taccagacattataaacacagtaccagacattataagtcatagactgttctctctgctaccgtccGCCAagcggtaccagacattataagtcatagactgttttctctgctaccgcccGCCAagcggtaccagacattataaacatggtaccagacattataagtcatagactgttttctctgctaccgcccGCCAagcggtaccagacattataaacatggtaccagacattataaacatggaACCAGACATtataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacacggtaccagacattataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacacggtaccagacattataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacacagtaccagacattataagtcatagactgttttctctgctaccgtccaccaagcggtaccaga
>TU110862
taccagacattataaacacagtaccagacattataagtcatagactgttctctctgctaccgtccGCCAagcggtaccagacattataagtcatagactgttttctctgctaccgcccGCCAagcggtaccagacattataaacatggtaccagacattataaacatggaACCAGACATtataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacacggtaccagacattataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacacagtaccagacattataagtcatagactgttttctctgctaccgcccGCCAagcggtaccagacattataaacatggtaccagacattataagtcatagactgttttctctgctaccgcccGCCAagcggtaccagacattataaacatggtaccagacattataaacatggaACCAGACATtataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacacggtaccagacattataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacacggtaccagacattataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacacagtaccagacattataagtcatagactgttttctctgctaccgtccaccaagcggtaccaga
>TU110859
aacacgataccagacattataaacatggtaattcacattataaacacagtaccagacattataaacacggtaccagacattataaacacggtcccagacattataaacatggtcccagacattataaacatggtaccagacattataaacatggtaccagacattataaacacagtaccagacattataaacatgataccagacattataaacacagtaccagacATtataagtcatagactgttttctctgctaccgcccGCCAAGccgtaccagacattataaacacagtaccagacattataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacatggaACCAGACATtataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacacggtaccagacattataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataagtcatagactgttttctctgctaccgcccGCCAagcggtaccagacattataaacatggtaccagacattataagtcatagactgttttctctgctaccgcccGCCAagcggtaccagacattataaacatggtaccagacattataagtcatagactgttttctctgctaccgtccaccaagcggtaccaga
>TU110861
aacacgataccagacattataaacatggtaattcacattataaacacagtaccagacattataaacacggtaccagacattataaacacggtcccagacattataaacatggtcccagacattataaacatggtaccagacattataaacatggtaccagacattataaacacagtaccagacattataaacatgataccagacattataaacacagtaccagacATtataagtcatagactgttttctctgctaccgcccGCCAAGccgtaccagacattataaacacagtaccagacattataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacatggaACCAGACATtataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacacggtaccagacattataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataagtcatagactgttttctctgctaccgcccGCCAagcggtaccagacattataaacatggtaccagacattataagtcatagactgttttctctgctaccgcccGCCAagcggtaccagacattataaacatggtaccagacattataagtcatagactgttttctctgctaccgcccGCCAagcggtaccagacattataaacatggtaccagacattataaacatggaACCAGACATtataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacacggtaccagacattataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacacggtaccagacattataagtcatagactgttttctctgctaccgcccACCAagcggtaccagacattataaacacagtaccagacattataagtcatagactgttttctctgctaccgtccaccaagcggtaccaga

Function

NR:

description
Dynein heavy chain

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110860 False 525 lncRNA 0.44 3 90643871 90802329
TU110862 False 768 lncRNA 0.44 3 90643871 90802329
TU110859 False 700 TUCP 0.41 4 90743959 90802329
TU110861 True 1017 TUCP 0.42 4 90743959 90802329

Neighbor

gene id symbol gene type direction distance location
LOC110519808 LOC106564289 coding upstream 4443 90616647 ~ 90639428 (+)
LOC110532996 LOC106577384 coding upstream 101624 90530291 ~ 90542247 (+)
LOC110531531 LOC106577352 coding upstream 175962 90342435 ~ 90467909 (+)
LOC110518596 pald1 coding upstream 326062 90157260 ~ 90317809 (+)
LOC118966076 spock2 coding upstream 540951 89982567 ~ 90102920 (+)
LOC110518968 LOC106564289 coding downstream 42184 90844513 ~ 90864552 (+)
LOC110531710 LOC106592262 coding downstream 68232 90870561 ~ 90896084 (+)
LOC110531853 LOC106577418 coding downstream 100916 90903245 ~ 90911857 (+)
LOC110531588 LOC106560822 coding downstream 274526 91076855 ~ 91086592 (+)
LOC118966092 NA coding downstream 1030903 91833232 ~ 91837213 (+)
G99864 NA non-coding upstream 55874 90587655 ~ 90587997 (+)
G99859 NA non-coding upstream 67703 90575495 ~ 90576168 (+)
G99857 NA non-coding upstream 71037 90572160 ~ 90572834 (+)
G99841 NA non-coding upstream 93422 90549411 ~ 90550449 (+)
G99839 NA non-coding upstream 95327 90548240 ~ 90548544 (+)
G99912 NA non-coding downstream 13475 90815804 ~ 90816389 (+)
G99919 NA non-coding downstream 63181 90865510 ~ 90866112 (+)
G99921 NA non-coding downstream 70109 90872438 ~ 90872809 (+)
G99922 NA non-coding downstream 74148 90876477 ~ 90876901 (+)
G99926 NA non-coding downstream 83934 90886263 ~ 90886529 (+)
G99868 NA other upstream 43133 90599726 ~ 90600738 (+)
G99488 NA other upstream 679428 89963873 ~ 89964443 (+)
G99486 NA other upstream 688252 89955026 ~ 89955619 (+)
G100371 NA other downstream 278465 91080666 ~ 91082721 (+)
G100377 NA other downstream 306920 91109249 ~ 91110862 (+)
G101557 NA other downstream 1724690 92527019 ~ 92531819 (+)
LOC110515411 LOC106564289 coding upstream 1838 90722882 ~ 90742121 (+)
LOC118966082 LOC106564289 coding upstream 53839 90671621 ~ 90690120 (+)
G99887 NA non-coding upstream 44402 90653194 ~ 90699557 (+)
G99883 NA non-coding upstream 47990 90649048 ~ 90695969 (+)
G99889 NA non-coding upstream 87951 90655690 ~ 90656008 (+)

Expression


Co-expression Network