XLOC_020443 (BX649608.2)


Basic Information

Item Value
gene id XLOC_020443
gene name BX649608.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 24378064 ~ 24381314 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040538
ATGGCTTTTCAACTCTTTGGTTATATCTTGACCATCGCTGGATTATGTGGCCTGCTTATAGGCACATTTACGAACGAATGGAAAATCAGCGGACACGACAATGACAAGTCTGTGATTCTGGTGAAATATGAAGGACTGTGGATGCAGTGTTCAGTCGACAGTTCGTCACATGTTCGATGCACCAATTTTAATTCTCTCCTTCATCAAACTTTTGAAATTCGGATGAGTCGAGTATTCATGATCATCAGCATCGTGTTGTCAAGCTTTGCTGTTCTGGTAGCTGTTTCTGGACTCAGATGCACAAAATTTTTAGACGACAATGAGACGATGAAGGACAGAACTGCCTTCTTTGGAGGAATCCTCTCTGTGTGTGGTGGTCTATTTGCTTTGGGAATAACCAGCTGGTTCACTTATTTAATTGTCGATGATTTCTACCAGAAGGACGATGACAAGGATAAgtaTGTTATCGGCAAATCTCTGATTGGTGCGTTTGTCGCATCTTTGCTCTGTTTATTCGGAGGTGTGTTTTTATGCGCCTGCAGCGTGAAGAGTCTGAGATCCAACAATAAGTTCAGCCAGCATCTGGTCTCCAAAAATCCTGAAAAAGACTACGTTTAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000115608

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040538 True 618 mRNA 0.42 4 24378064 24381314

Neighbor

gene id symbol gene type direction distance location
XLOC_020442 ccdc50 coding upstream 15352 24318131 ~ 24362712 (+)
XLOC_020441 uchl5 coding upstream 144208 24220937 ~ 24233856 (+)
XLOC_020440 glrx2 coding upstream 158981 24214665 ~ 24219083 (+)
XLOC_020439 NA coding upstream 181014 24195021 ~ 24197050 (+)
XLOC_020438 b3galt2 coding upstream 208975 24157807 ~ 24169089 (+)
XLOC_020444 p3h2 coding downstream 7821 24389135 ~ 24482035 (+)
XLOC_020445 BX784032.1 coding downstream 110313 24491627 ~ 24500269 (+)
XLOC_020446 wdr47b coding downstream 178633 24559947 ~ 24591645 (+)
XLOC_020447 CU655842.1 coding downstream 222616 24603930 ~ 24623019 (+)
XLOC_020448 mcoln2 coding downstream 242622 24623936 ~ 24633418 (+)
XLOC_020436 CR388178.2 non-coding upstream 884732 23492326 ~ 23493332 (+)
XLOC_020435 NA non-coding upstream 888185 23484437 ~ 23489879 (+)
XLOC_020434 NA non-coding upstream 993608 23384198 ~ 23384456 (+)
XLOC_020432 NA non-coding upstream 1115019 23228710 ~ 23263045 (+)
XLOC_020451 NA non-coding downstream 332939 24714253 ~ 24851829 (+)
XLOC_020456 NA non-coding downstream 745928 25127242 ~ 25128870 (+)
XLOC_020457 NA non-coding downstream 759584 25140898 ~ 25141630 (+)
XLOC_020469 NA non-coding downstream 1005009 25386323 ~ 25386800 (+)

Expression


Co-expression Network