G100282


Basic Information

Item Value
gene id G100282
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 90895687 ~ 90898053 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU111470
ccttgctcaaaggcacgtCGACAGATTCTTTCCCCCCTAGTCTGctaggggattcaaaccagtgatctttcagttactgacccaacgttCTTAAGTGCTAGGCTACCTACAGTAGCACCCTGTACTTCCCCCAGTTGttctcaagttggctggatgtcctttaggtggtggaccattcttgatacacacgggaaactgttgagcatgaaaaacctagcagcgttgcacttcttgacacaaaccgatgcgCCTGAAACGTTATGGGCGGTAGGTGTTATGGGCGGGACCTAGGGGTGCTGGCCCGCCCTACctacctccttgcccgtccaaataaaatatagaaataTTGATCATTTATTTGACCAAGACGCGCGCAGACAGAAATACGCATCAATCTCAGATAAAGCATTCGAGCGAGCGAAaaagcatccctctgtctctatggATTGCTATGGATTGTTTGCCTATTCCTATTTGGGAAACCAGCAATTTGGGCAGTGCGCATGGCAATAGACCTCGCTGATTATTGAGTTGTGGCTGTCAGTGAAAAACATCTCaaatgtgtgaagataatgtgtctCGAGACTAATTTAAAAATTTTGCAACAAGAAGTAGGGGAGAGATGTGTGGCGAAGATATGggcgtctctctccagaatgttcCCCCTGCGGTCTCCTGACAATTATTGCACAttcattgttgtgaattgtttgcTCTTcgattgtttgttttgttcaattcTCCATCATATATGTAACCAGTAGGCATAGTAGATGTGCCGTTCATCCCGTCATTTGGttacatttctgttaatgcatgtatTTACAGTCATTTACCGTTCTCCTTCCCGGAGTGGAAAAACGTTGTTTGCATAGTTCAAAACCTgatacacttgtgagaaacaacaAGTACGGGTTTATTTTATATCCATCTGAGAGAGCAATGAGCATGTATGTGGGTTCTCTGTCCTGATAACGTTGAGtcatagctcaagtcaagacagatggAAAGGGAGGCTGAGTAGAGCATTCATGAGAACCTGcattttcatcaggatattttGCTGTTTGTATTTGTCGGCTTTAGGCCTATGTAATCTATTGTTTATTTGTCGGCTTTAGGCCTATGTATTCTATTGTTTATTTGTCGGCTTTAGGACTATGTATTCTATTGTTTATTTGTAGGCTTTAGGCCTATGTATTTTACTGTGTTAAGGTGTTCTTAACGTTTCGTATACTCAGCGTATGTTTATACAGTAAAATCATAAAATCAGATCTGAtccatagaggagagaggagttcaGGGGTTAGTCCTGGGGGGCGTCTAGGGTCTCCAGCGTCAGCCACAGCCCCCCCTCGGCCCTGAGCACCAGCTGGGGTAGCCTCCTCACCTCCACCCCCCCAGGGGTCAAACGGAACCTCCTCAAGGTCAGCGCCACCACCACACGCAGCTCCGCCATGGCAAACTTCT

Function

NR:

description
phylloquinone omega-hydroxylase CYP4F2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111470 True 1470 lncRNA 0.45 2 90895687 90898053

Neighbor

gene id symbol gene type direction distance location
LOC110513773 LOC107083051 coding downstream 81756 90803324 ~ 90813931 (-)
LOC118966739 LOC106577420 coding downstream 147296 90746652 ~ 90748391 (-)
LOC118966738 LOC106594844 coding downstream 149081 90745393 ~ 90746606 (-)
LOC118966737 LOC106577420 coding downstream 198752 90695281 ~ 90696935 (-)
LOC118966736 LOC106585883 coding downstream 200454 90693579 ~ 90695233 (-)
LOC118936689 dpysl4 coding upstream 21942 90919995 ~ 90970591 (-)
LOC110516041 jakmip3 coding upstream 85214 90982735 ~ 91072716 (-)
LOC110531579 LOC106577354 coding upstream 192358 91090411 ~ 91119379 (-)
LOC118966091 tcerg1l coding upstream 419115 91317168 ~ 91530447 (-)
LOC110531398 glrx3 coding upstream 895565 91791792 ~ 91832379 (-)
G100278 LOC106592262 non-coding downstream 5442 90884816 ~ 90890245 (-)
G100271 NA non-coding downstream 27927 90867490 ~ 90867760 (-)
G100201 NA non-coding downstream 97476 90741415 ~ 90798211 (-)
G100202 NA non-coding downstream 114978 90736226 ~ 90780709 (-)
G100204 NA non-coding downstream 123497 90751146 ~ 90772190 (-)
G100288 NA non-coding upstream 10436 90908489 ~ 90909346 (-)
G100291 LOC106577418 non-coding upstream 12898 90910951 ~ 90911887 (-)
G100296 NA non-coding upstream 20362 90918415 ~ 90918691 (-)
G100384 NA non-coding upstream 21511 90919564 ~ 90919854 (-)
G100391 NA non-coding upstream 40673 90938726 ~ 90939404 (-)
G100197 NA other downstream 36715 90625080 ~ 90858972 (-)
G99602 NA other downstream 931482 89963873 ~ 89964205 (-)
G99595 NA other downstream 937771 89957392 ~ 89957916 (-)
G99035 NA other downstream 1605631 89287214 ~ 89290056 (-)
ghitm LOC100136239 other downstream 1643599 89223150 ~ 89270371 (-)
G100582 NA other upstream 334687 91232740 ~ 91233788 (-)
G102060 NA other upstream 1693528 92591581 ~ 92595514 (-)
G102083 NA other upstream 1739245 92637298 ~ 92638881 (-)

Expression


Co-expression Network