Gene
RNA
| Item | Value |
|---|---|
| gene id | G100391 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 90938726 ~ 90939404 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU111646 | True | 338 | lncRNA | 0.55 | 2 | 90938726 | 90939404 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513773 | LOC107083051 | coding | downstream | 124795 | 90803324 ~ 90813931 (-) |
| LOC118966739 | LOC106577420 | coding | downstream | 190335 | 90746652 ~ 90748391 (-) |
| LOC118966738 | LOC106594844 | coding | downstream | 192120 | 90745393 ~ 90746606 (-) |
| LOC118966737 | LOC106577420 | coding | downstream | 241791 | 90695281 ~ 90696935 (-) |
| LOC118966736 | LOC106585883 | coding | downstream | 243493 | 90693579 ~ 90695233 (-) |
| LOC110516041 | jakmip3 | coding | upstream | 43863 | 90982735 ~ 91072716 (-) |
| LOC110531579 | LOC106577354 | coding | upstream | 151007 | 91090411 ~ 91119379 (-) |
| LOC118966091 | tcerg1l | coding | upstream | 377764 | 91317168 ~ 91530447 (-) |
| LOC110531398 | glrx3 | coding | upstream | 854214 | 91791792 ~ 91832379 (-) |
| LOC118966740 | NA | coding | upstream | 1604485 | 92543889 ~ 92544887 (-) |
| G100384 | NA | non-coding | downstream | 18872 | 90919564 ~ 90919854 (-) |
| G100296 | NA | non-coding | downstream | 20035 | 90918415 ~ 90918691 (-) |
| G100291 | LOC106577418 | non-coding | downstream | 26839 | 90910951 ~ 90911887 (-) |
| G100288 | NA | non-coding | downstream | 29380 | 90908489 ~ 90909346 (-) |
| G100282 | NA | non-coding | downstream | 40673 | 90895687 ~ 90898053 (-) |
| G100396 | NA | non-coding | upstream | 28250 | 90967654 ~ 90968153 (-) |
| G100400 | NA | non-coding | upstream | 53732 | 90993136 ~ 90993693 (-) |
| G100403 | NA | non-coding | upstream | 61005 | 91000409 ~ 91007906 (-) |
| G100426 | NA | non-coding | upstream | 107564 | 91046968 ~ 91047820 (-) |
| G100430 | NA | non-coding | upstream | 113300 | 91052704 ~ 91053040 (-) |
| G100197 | NA | other | downstream | 79754 | 90625080 ~ 90858972 (-) |
| G99602 | NA | other | downstream | 974521 | 89963873 ~ 89964205 (-) |
| G99595 | NA | other | downstream | 980810 | 89957392 ~ 89957916 (-) |
| G99035 | NA | other | downstream | 1648670 | 89287214 ~ 89290056 (-) |
| ghitm | LOC100136239 | other | downstream | 1686638 | 89223150 ~ 89270371 (-) |
| G100582 | NA | other | upstream | 293336 | 91232740 ~ 91233788 (-) |
| G102060 | NA | other | upstream | 1652177 | 92591581 ~ 92595514 (-) |
| G102083 | NA | other | upstream | 1697894 | 92637298 ~ 92638881 (-) |
