G100912



Basic Information


Item Value
gene id G100912
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 91623301 ~ 91623521 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU112300
GATATAGTCGAGCCCTAAACAGGATTTACTTTACTGAGTGGCTCTAATTCTCATTATTTAACAATCACCTAAAGCCATTGCAGTCAAAGCCCAACGGAAGGCTATTATTCCTGTTCAGCAATCACAACTCTCATAACAAATGACTGAGTCCAACATTCTCCCTCCAGAAGTCTCCATGATGAACAGGAGTGTAAAGCCTTGTCTCTTTTGGGGCTGAAGAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU112300 True 221 lncRNA 0.47 1 91623301 91623521

Neighbor


gene id symbol gene type direction distance location
LOC118966091 tcerg1l coding downstream 92854 91317168 ~ 91530447 (-)
LOC110531579 LOC106577354 coding downstream 503922 91090411 ~ 91119379 (-)
LOC110516041 jakmip3 coding downstream 550585 90982735 ~ 91072716 (-)
LOC118936689 dpysl4 coding downstream 652710 90919995 ~ 90970591 (-)
LOC110513773 LOC107083051 coding downstream 809370 90803324 ~ 90813931 (-)
LOC110531398 glrx3 coding upstream 170097 91791792 ~ 91832379 (-)
LOC118966740 NA coding upstream 920368 92543889 ~ 92544887 (-)
LOC118966741 NA coding upstream 993535 92617056 ~ 92622002 (-)
LOC118966742 NA coding upstream 1223943 92847464 ~ 92848944 (-)
LOC118966095 NA coding upstream 1225519 92849040 ~ 92850460 (-)
G100901 NA non-coding downstream 11726 91611154 ~ 91611575 (-)
G100899 NA non-coding downstream 23172 91599885 ~ 91600129 (-)
G100890 NA non-coding downstream 28934 91594072 ~ 91594367 (-)
G100884 NA non-coding downstream 39563 91583468 ~ 91583738 (-)
G100860 NA non-coding downstream 60514 91562416 ~ 91562787 (-)
G100915 NA non-coding upstream 4545 91628066 ~ 91628294 (-)
G100921 NA non-coding upstream 11668 91635189 ~ 91636254 (-)
G100923 NA non-coding upstream 17080 91640601 ~ 91641123 (-)
G100932 NA non-coding upstream 26535 91650056 ~ 91650469 (-)
G100934 NA non-coding upstream 28322 91651843 ~ 91653495 (-)
G100582 NA other downstream 389513 91232740 ~ 91233788 (-)
G100197 NA other downstream 764329 90625080 ~ 90858972 (-)
G99602 NA other downstream 1659096 89963873 ~ 89964205 (-)
G99595 NA other downstream 1665385 89957392 ~ 89957916 (-)
G102060 NA other upstream 968060 92591581 ~ 92595514 (-)
G102083 NA other upstream 1013777 92637298 ~ 92638881 (-)
G102119 NA other upstream 1115492 92739013 ~ 92739530 (-)
G102158 NA other upstream 1250048 92873569 ~ 92874498 (-)

Expression



Co-expression Network