G101121



Basic Information


Item Value
gene id G101121
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 91926360 ~ 91927102 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU112614
tactactactactaccctactaacagacctggtagtgttactactactactactactactaccctactaacagacctggtagtgttactactactactactaccctactaacagacctggtagtgttactactactactactactactaccctactaacagacctggtagtgttactactactactactaccctactaacagacctggtagtgttactactactactactactactactaacagacctggtagtgttactactactactactactactactaccctactaacagacctggtagtgttactactactactactaccctactaacagacctggtagtgttactactactactactactactaccctactaacagacctggtagtgttactactactactactactactactaacagacctggtagtgttattactactactactaccctactaacagacctggtagtgttattactactactaccctactaacagacctggtagtgtcactactactactactaccctactaac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU112614 True 542 lncRNA 0.43 2 91926360 91927102

Neighbor


gene id symbol gene type direction distance location
LOC110531613 LOC106577355 coding upstream 41980 91877562 ~ 91884380 (+)
LOC118966092 NA coding upstream 89147 91833232 ~ 91837213 (+)
LOC110531588 LOC106560822 coding upstream 839768 91076855 ~ 91086592 (+)
LOC110531853 LOC106577418 coding upstream 1014503 90903245 ~ 90911857 (+)
LOC110531710 LOC106592262 coding upstream 1030276 90870561 ~ 90896084 (+)
LOC110522569 LOC106613918 coding downstream 85650 92012752 ~ 92084472 (+)
LOC118964553 NA coding downstream 432896 92359998 ~ 92362861 (+)
LOC110533005 clrn3 coding downstream 1100477 93027579 ~ 93034467 (+)
LOC118966102 NA coding downstream 1118924 93046026 ~ 93047232 (+)
LOC110501964 LOC106589166 coding downstream 1494678 93421780 ~ 93475392 (+)
G101116 NA non-coding upstream 12932 91910807 ~ 91913428 (+)
G101092 NA non-coding upstream 55924 91869886 ~ 91870436 (+)
G101077 NA non-coding upstream 79146 91846992 ~ 91847214 (+)
G101073 NA non-coding upstream 82232 91843808 ~ 91844128 (+)
G101196 NA non-coding downstream 50949 91978051 ~ 91978285 (+)
G101203 NA non-coding downstream 57032 91984134 ~ 91984369 (+)
G101204 NA non-coding downstream 60537 91987639 ~ 91988123 (+)
G101208 NA non-coding downstream 68037 91995139 ~ 91995375 (+)
G100377 NA other upstream 815498 91109249 ~ 91110862 (+)
G100371 NA other upstream 843639 91080666 ~ 91082721 (+)
G99880 NA other upstream 1124031 90643871 ~ 90802329 (+)
G101557 NA other downstream 599917 92527019 ~ 92531819 (+)
G101642 LOC106594265 other downstream 940574 92867676 ~ 92872700 (+)
G101737 NA other downstream 1088820 93015922 ~ 93016762 (+)
LOC110511695 LOC106577385 other downstream 1818948 93722388 ~ 93770095 (+)
G102505 NA other downstream 1906022 93833124 ~ 93835192 (+)

Expression



Co-expression Network