G102880


Basic Information

Item Value
gene id G102880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 94403507 ~ 94405457 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU115144
CCTAGACAGGACCCTAACACCTAGTAGACTAATCATTGTAACCTAGCCAGAGACAGGACCCTAACACCTAGTAGTCTAATCATTGTAACCTAGCCAGAGACAGGACCCTAACACCTAGTAGTCTAATCATTGTAACCTAGACAGGACCCTAACACCTAGTAGTCTAATCATTGTAACCTAGACAGGACCCTAACACCTAGCAGACTAATCATTGTAACCTAGCCAGGACCCTAACGCCTAGCAGACTAATCATTGTAACCTAGCCAGCTAGTACCGTCTGAGGCTGTGGGTGTTAGTGTTGTGAGGTTGTGTCAGCCACCTGATAGGTCTAGATTATTCATGAGTCAGATAGTAACCTAGCCAGCTAGTACCGGCTGTGGTTGTTAGTGTTGTGAGGTTGTGTCAGCCACCTGATAGGTCTAGATTATTCATGAGTCAGATAGTAACCTAGCCAGCTAGTACCGTCTGAGGCTGTGGTTGTTAGTGTTGTGAGGTTGTGTCAGCCACCTGATAGGTCTAGATTATTCATGAGTCAGATAGTAACCTAGCCAGCTAGTACCGTCTGAGGCTGTGGTTGTTAGTGTTGTGAGGTTGTGTCAGCCACCTGATAGGTCTAGATTATTCATGAGTCAGATAGTAACCTAGCCAGCTAGTACCGTCTGAGGCTGTGGTTGTTAGTGTTGTGAGGTTGTGTCAGCCACCTGATAGGTCTAGATTATTCATGAATCAGATAGTAACCTAGCCAGCTAGTACCGTCTGAGGCTGTGGTTGTTAGTGTTGTGAGGTTGTGTCAGCCACCTGATAGGTCTAGATTATTCATGAGTCAGTCAATGTAGAAGACAATAGTGCAGTTTGTTCTCAGACACACCATGACTtcctcccaaatggcatcctattggtctgcttcacaaatggcaccctatcgcATGGCACCCTATcgaatcgcaccctattcccctttTAAACACTACTTTTTTACCCGGAGCCTtgatcaacagtagtgcactataaaataaatagggttctatagggccctggtctaaagtagtgcactataaaataaatagggttctatagggccctggtctaaagtagtgcactatatagggaatagggttctatagggctctggtctaaagtagtgcactataaaataaatagggttctatagggctctggtctaaagtagtgcactatatagggaatagggttctatagggctctggtctaaagtagtgtactatatagggaatagggttctatagagctctggtctaaagtagtgcactatatagggaatagggtgccatttgggacgcatcacAGGAGTTAATCTGCTATGCAAATGTAAACAGGTGAAACCAGTCCACGATGACGAagcacagtgtgtttgtgtcattccacagattcttCTTCGTGTGGTAATGTACCGTGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115144 True 1437 lncRNA 0.44 3 94403507 94405457
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110531886 LOC106577432 coding downstream 33480 94362379 ~ 94370027 (-)
LOC118966131 NA coding downstream 45665 94350278 ~ 94357842 (-)
LOC118966130 LOC106577431 coding downstream 61699 94323402 ~ 94341808 (-)
LOC110531895 LOC106613909 coding downstream 85133 94304371 ~ 94318374 (-)
LOC110531859 LOC106577432 coding downstream 108853 94283183 ~ 94294654 (-)
LOC118966144 LOC106577436 coding upstream 1229704 95635147 ~ 95672256 (-)
LOC110514271 rgs7 coding upstream 1284258 95689394 ~ 95720002 (-)
G102858 NA non-coding downstream 10373 94314881 ~ 94393134 (-)
G102861 NA non-coding downstream 72591 94330003 ~ 94330916 (-)
G102838 NA non-coding downstream 161102 94242051 ~ 94242405 (-)
G102896 NA non-coding upstream 34252 94439709 ~ 94439919 (-)
G102898 NA non-coding upstream 40811 94446268 ~ 94446536 (-)
G102902 NA non-coding upstream 60585 94466042 ~ 94466289 (-)
G102939 NA non-coding upstream 72893 94478350 ~ 94482790 (-)
G102946 NA non-coding upstream 80735 94486192 ~ 94486790 (-)
G102679 NA other downstream 287819 94110119 ~ 94115688 (-)
G102641 LOC106593079 other downstream 380204 94023009 ~ 94023303 (-)
LOC110513667 LOC106592544 other downstream 802887 93182405 ~ 93710353 (-)
G102290 NA other downstream 1063863 93301985 ~ 93339644 (-)
G102887 NA other upstream 17351 94422808 ~ 94423087 (-)
G103509 NA other upstream 843635 95249092 ~ 95327889 (-)
G103698 LOC106560310 other upstream 1118935 95524392 ~ 95530959 (-)

Expression

G102880 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 3.
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G102880 Expression in each Bioproject

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G102880 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network